Miyakogusa Predicted Gene

Lj0g3v0126739.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126739.2 tr|B9IBW3|B9IBW3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_774201 PE=4
SV=1,56.84,0,seg,NULL; Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; NTP_transf_2,Nucleoti,CUFF.7657.2
         (1510 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g03890.2                                                      1078   0.0  
Glyma03g03890.1                                                      1078   0.0  
Glyma01g33160.1                                                       297   8e-80
Glyma13g35290.1                                                        66   4e-10
Glyma13g35290.2                                                        66   4e-10

>Glyma03g03890.2 
          Length = 742

 Score = 1078 bits (2787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/728 (75%), Positives = 574/728 (78%), Gaps = 57/728 (7%)

Query: 783  MSFDWPPVFRGGVNPSPNCNYDSGFVSRRQCTFSKGLAVQSMQVDATTTDDERKYPGDIL 842
            MSFDWPPVFRG   P                 F K     +           RKY GD+ 
Sbjct: 1    MSFDWPPVFRGSNVP-----------------FQKDWLFTTC----------RKYSGDVW 33

Query: 843  DSPDLTNAQELADEFDNHWVSEEEYDFHTVSGIDYNQYFGGGIMYWDTSDHPGKGFSRXX 902
            D PDLTN  ELADEFDNH VSEEEY+ HTVSGIDYNQYFGGG+MYW+ SD+PGKGFSR  
Sbjct: 34   DLPDLTNTLELADEFDNHCVSEEEYEVHTVSGIDYNQYFGGGVMYWNPSDYPGKGFSRPP 93

Query: 903  XXXXXXXXWALREADMNRTVDDMVAFPSSYSTNGLTSPTAATFCSPFDPAGTGSQTVGYV 962
                    WALR+ADMNRTVDDMVAF SSYSTNGLTSPTAATFCSPFDP GT +QT+GYV
Sbjct: 94   SLSSDDSLWALRDADMNRTVDDMVAFSSSYSTNGLTSPTAATFCSPFDPVGTATQTIGYV 153

Query: 963  VSGNEVPGNVLHSSPVSDAVVDEDTSGSLSNNLTGDIEGKTGDAHPYPLLRPIIIPNFSR 1022
            +SGNEVPG +LHSS V+DA VDEDTSGSL NNL G++EGK GD+HPYP+LRPIIIPN SR
Sbjct: 154  MSGNEVPGKMLHSSSVTDAAVDEDTSGSLGNNLPGEVEGKAGDSHPYPILRPIIIPNLSR 213

Query: 1023 ERSRCADHKSPCVPPNRREQPRIKRPPSXXXXXXXXXXXXXXXXXXXXXXKQRGFPTVRS 1082
            ER    DHKSPCVPP+RREQPRIKRPPS                      K RGFPTVRS
Sbjct: 214  ER---FDHKSPCVPPSRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRS 270

Query: 1083 GSSSPRHWGMRGWYHDGSNLEEACLRMDGAEVVWPSWRSNNXXXXXXXXXXXXXXXXDRL 1142
            GSSSPRHWGMRGWYHDGSN EEACLRMDGAEVVWP WRSNN                DRL
Sbjct: 271  GSSSPRHWGMRGWYHDGSNFEEACLRMDGAEVVWP-WRSNNLAVRPLIQPLPAALLQDRL 329

Query: 1143 IAISQITRDQEHVRKTITLSSTLSIYVGVHCGFLIIQPDVTFPLQPPELQSCSATSASLS 1202
            IA+SQI RDQEH                         PDVTFPLQPP+LQSCSA SASL+
Sbjct: 330  IALSQIARDQEH-------------------------PDVTFPLQPPDLQSCSAQSASLT 364

Query: 1203 LMHGMLHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMSL 1262
            LMHG+LHDEIDSFCKQVAAENMARRPYINWAVKRVTR LQVLWPRSRTNIFGSNATGMSL
Sbjct: 365  LMHGILHDEIDSFCKQVAAENMARRPYINWAVKRVTRFLQVLWPRSRTNIFGSNATGMSL 424

Query: 1263 PTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKTDSLKTVEN 1322
            PTSDVDLVV LPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVK DSLKTVEN
Sbjct: 425  PTSDVDLVVGLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVEN 484

Query: 1323 TAIPIIMLVVEVPLEVITSSAPVIHSLKEEPHCTPGEHVNDSHSDSIHLEGSALPKSSEI 1382
            TAIPIIMLVVEVP +VITS AP+I SL EEPHCTPGEH ND+ SDSI LE SALPK S++
Sbjct: 485  TAIPIIMLVVEVPQDVITSLAPMIQSLNEEPHCTPGEHGNDNQSDSIRLEDSALPKGSQM 544

Query: 1383 NFYALKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQS 1442
             F ALK SKSVR+DISFKSPSHTGLQTTEMVK LT QFPAATPLALVLKQFLADRSLDQS
Sbjct: 545  KFDALK-SKSVRLDISFKSPSHTGLQTTEMVKELTAQFPAATPLALVLKQFLADRSLDQS 603

Query: 1443 YSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSG 1502
            YSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQG+G
Sbjct: 604  YSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGTG 663

Query: 1503 LYIKRERG 1510
            LYIKRERG
Sbjct: 664  LYIKRERG 671


>Glyma03g03890.1 
          Length = 742

 Score = 1078 bits (2787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/728 (75%), Positives = 574/728 (78%), Gaps = 57/728 (7%)

Query: 783  MSFDWPPVFRGGVNPSPNCNYDSGFVSRRQCTFSKGLAVQSMQVDATTTDDERKYPGDIL 842
            MSFDWPPVFRG   P                 F K     +           RKY GD+ 
Sbjct: 1    MSFDWPPVFRGSNVP-----------------FQKDWLFTTC----------RKYSGDVW 33

Query: 843  DSPDLTNAQELADEFDNHWVSEEEYDFHTVSGIDYNQYFGGGIMYWDTSDHPGKGFSRXX 902
            D PDLTN  ELADEFDNH VSEEEY+ HTVSGIDYNQYFGGG+MYW+ SD+PGKGFSR  
Sbjct: 34   DLPDLTNTLELADEFDNHCVSEEEYEVHTVSGIDYNQYFGGGVMYWNPSDYPGKGFSRPP 93

Query: 903  XXXXXXXXWALREADMNRTVDDMVAFPSSYSTNGLTSPTAATFCSPFDPAGTGSQTVGYV 962
                    WALR+ADMNRTVDDMVAF SSYSTNGLTSPTAATFCSPFDP GT +QT+GYV
Sbjct: 94   SLSSDDSLWALRDADMNRTVDDMVAFSSSYSTNGLTSPTAATFCSPFDPVGTATQTIGYV 153

Query: 963  VSGNEVPGNVLHSSPVSDAVVDEDTSGSLSNNLTGDIEGKTGDAHPYPLLRPIIIPNFSR 1022
            +SGNEVPG +LHSS V+DA VDEDTSGSL NNL G++EGK GD+HPYP+LRPIIIPN SR
Sbjct: 154  MSGNEVPGKMLHSSSVTDAAVDEDTSGSLGNNLPGEVEGKAGDSHPYPILRPIIIPNLSR 213

Query: 1023 ERSRCADHKSPCVPPNRREQPRIKRPPSXXXXXXXXXXXXXXXXXXXXXXKQRGFPTVRS 1082
            ER    DHKSPCVPP+RREQPRIKRPPS                      K RGFPTVRS
Sbjct: 214  ER---FDHKSPCVPPSRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRS 270

Query: 1083 GSSSPRHWGMRGWYHDGSNLEEACLRMDGAEVVWPSWRSNNXXXXXXXXXXXXXXXXDRL 1142
            GSSSPRHWGMRGWYHDGSN EEACLRMDGAEVVWP WRSNN                DRL
Sbjct: 271  GSSSPRHWGMRGWYHDGSNFEEACLRMDGAEVVWP-WRSNNLAVRPLIQPLPAALLQDRL 329

Query: 1143 IAISQITRDQEHVRKTITLSSTLSIYVGVHCGFLIIQPDVTFPLQPPELQSCSATSASLS 1202
            IA+SQI RDQEH                         PDVTFPLQPP+LQSCSA SASL+
Sbjct: 330  IALSQIARDQEH-------------------------PDVTFPLQPPDLQSCSAQSASLT 364

Query: 1203 LMHGMLHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMSL 1262
            LMHG+LHDEIDSFCKQVAAENMARRPYINWAVKRVTR LQVLWPRSRTNIFGSNATGMSL
Sbjct: 365  LMHGILHDEIDSFCKQVAAENMARRPYINWAVKRVTRFLQVLWPRSRTNIFGSNATGMSL 424

Query: 1263 PTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKTDSLKTVEN 1322
            PTSDVDLVV LPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVK DSLKTVEN
Sbjct: 425  PTSDVDLVVGLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVEN 484

Query: 1323 TAIPIIMLVVEVPLEVITSSAPVIHSLKEEPHCTPGEHVNDSHSDSIHLEGSALPKSSEI 1382
            TAIPIIMLVVEVP +VITS AP+I SL EEPHCTPGEH ND+ SDSI LE SALPK S++
Sbjct: 485  TAIPIIMLVVEVPQDVITSLAPMIQSLNEEPHCTPGEHGNDNQSDSIRLEDSALPKGSQM 544

Query: 1383 NFYALKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQS 1442
             F ALK SKSVR+DISFKSPSHTGLQTTEMVK LT QFPAATPLALVLKQFLADRSLDQS
Sbjct: 545  KFDALK-SKSVRLDISFKSPSHTGLQTTEMVKELTAQFPAATPLALVLKQFLADRSLDQS 603

Query: 1443 YSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSG 1502
            YSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQG+G
Sbjct: 604  YSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGTG 663

Query: 1503 LYIKRERG 1510
            LYIKRERG
Sbjct: 664  LYIKRERG 671


>Glyma01g33160.1 
          Length = 213

 Score =  297 bits (760), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 171/255 (67%), Positives = 176/255 (69%), Gaps = 66/255 (25%)

Query: 1224 MARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPPVRNLEPIK 1283
            MARRPYINWAVKRVTR LQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPP    EPIK
Sbjct: 1    MARRPYINWAVKRVTRFLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPP----EPIK 56

Query: 1284 EAGILEGRNGIKETCLQHAARYLANQDWVKTDSLKTVENTAIPIIMLVVEVPLEVITSSA 1343
            EAGILEGRNGIKETCLQ                        IPIIMLVVE          
Sbjct: 57   EAGILEGRNGIKETCLQ------------------------IPIIMLVVE---------- 82

Query: 1344 PVIHSLKEEPHCTPGEHVNDSHSDSIHLEGSALPKSSEINFYALKESKSVRVDISFKSPS 1403
                                       LE  AL K S++ F ALK SKSVR+DI+FKSPS
Sbjct: 83   ---------------------------LEDLALSKRSQMKFDALK-SKSVRLDINFKSPS 114

Query: 1404 HTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHE 1463
            HTGLQTTEMVK LTEQFPAATPLALVLKQFLADRSLDQS SGGLSSYCLVLLIIRFLQHE
Sbjct: 115  HTGLQTTEMVKGLTEQFPAATPLALVLKQFLADRSLDQSDSGGLSSYCLVLLIIRFLQHE 174

Query: 1464 HHLGRPINQNYGSLL 1478
            HHLG PINQ  G+ L
Sbjct: 175  HHLGWPINQLNGNYL 189


>Glyma13g35290.1 
          Length = 527

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 1387 LKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGG 1446
            +++   +  DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG
Sbjct: 223  VEKRSGIAFDISFDI--DNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGG 280

Query: 1447 LSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSG-LYI 1505
            + SY L+ +++  L++          N G LL+ F  F+G   +   + +S  G+G  ++
Sbjct: 281  IGSYALLTMLMAMLRNLRLSQASAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFV 340

Query: 1506 KRERG 1510
            K  +G
Sbjct: 341  KSSKG 345


>Glyma13g35290.2 
          Length = 384

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)

Query: 1387 LKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGG 1446
            +++   +  DISF      G +  E ++    ++P   PL L+LK FL  R L++ YSGG
Sbjct: 223  VEKRSGIAFDISFDI--DNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGG 280

Query: 1447 LSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSG-LYI 1505
            + SY L+ +++  L++          N G LL+ F  F+G   +   + +S  G+G  ++
Sbjct: 281  IGSYALLTMLMAMLRNLRLSQASAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFV 340

Query: 1506 KRERG 1510
            K  +G
Sbjct: 341  KSSKG 345