Miyakogusa Predicted Gene

Lj0g3v0126639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126639.1 tr|A9SZ39|A9SZ39_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_137774,30.85,1e-18,no description,NULL; PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; METHYLTRANSFERASE,NULL;
Methyltransf_11,,CUFF.7618.1
         (251 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g11170.1                                                       282   3e-76
Glyma01g35310.1                                                       110   1e-24
Glyma08g13760.1                                                       109   3e-24
Glyma09g34740.1                                                       106   2e-23
Glyma10g11630.1                                                        77   2e-14
Glyma11g29710.1                                                        67   2e-11
Glyma18g06390.1                                                        54   2e-07
Glyma01g31900.1                                                        53   3e-07
Glyma19g36500.1                                                        51   1e-06
Glyma18g43970.1                                                        50   2e-06
Glyma03g33760.1                                                        49   4e-06

>Glyma12g11170.1 
          Length = 232

 Score =  282 bits (721), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 142/232 (61%), Positives = 165/232 (71%), Gaps = 7/232 (3%)

Query: 27  FLKKLSFGXXXXXXXXXXXXXXHTPDTCIPTHAPPHPPLRFPKSPCDYPPTRPHLPLHKK 86
           FLK+LSF                TPDTC+P HAP  P LRFPKS CD+  TRPH+P  K+
Sbjct: 1   FLKRLSFVAIAVASLTLLFLLLRTPDTCVPHHAPRKPHLRFPKSTCDFSSTRPHVPAEKR 60

Query: 87  NHRLWSSRAWNTTVHSFS-------XXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLL 139
             R+ S+R W   V SFS                    NHSR LCVSAGAGHEVAAL  L
Sbjct: 61  ALRIQSTRLWTAKVLSFSLLFRDHLLPLLLSAASSNNYNHSRVLCVSAGAGHEVAALRRL 120

Query: 140 GVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPG 199
           G++DVTGVE+L+SPPLV RADPHNLPFFD AFDLAFTARFDEALFPARFAAEMERVVRPG
Sbjct: 121 GIDDVTGVEILESPPLVRRADPHNLPFFDGAFDLAFTARFDEALFPARFAAEMERVVRPG 180

Query: 200 GACYVLVGECGISEVMEVVRLFRNSKLVSSDKVTLSGMRMTSILMRTRQSTS 251
           GAC++LV E G  EV +VV LFRNS+LV S  V+L+GMRMTS+++RTR+++S
Sbjct: 181 GACFLLVAESGEDEVRQVVELFRNSRLVGSSNVSLTGMRMTSVILRTRENSS 232


>Glyma01g35310.1 
          Length = 222

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 9/164 (5%)

Query: 83  LHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVE 142
           L+ K  ++W++R WN  +  F+            +N S+ALC+ A  G EV AL  +GV 
Sbjct: 56  LNPKLRKIWTTRDWNRKIPVFARFFEDLKVKKLLKNTSKALCIGARVGQEVEALRRIGVV 115

Query: 143 DVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGAC 202
           D  G++L+  PPLV + D HN PF ++ FD  F+  FD AL+P RF +E+ER ++P G C
Sbjct: 116 DSVGMDLVPYPPLVMKGDFHNQPFQNDTFDFEFSNVFDHALYPQRFVSEIERTLKPEGVC 175

Query: 203 YVLVG---------ECGISEVMEVVRLFRNSKLVSSDKVTLSGM 237
            + V             +  V  +V LF+ S LV    V   G+
Sbjct: 176 VLHVALSRRADKYSANDLYSVQPLVELFKRSALVHVRSVDGFGL 219


>Glyma08g13760.1 
          Length = 227

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 9/164 (5%)

Query: 83  LHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVE 142
           L+ +  ++W++R WN  +  F+             N S+ALC+ A  G EV AL  +GV 
Sbjct: 57  LNPRLRKIWTTRDWNRKIPVFARFFEDLKDKKLLNNASKALCIGARVGQEVEALRRIGVS 116

Query: 143 DVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGAC 202
           D  G++L+  PPLV + D HN PF D  FD  F+  FD AL+P RF  E+ER ++P G C
Sbjct: 117 DSVGMDLVPYPPLVVKGDFHNQPFDDGTFDFEFSNVFDHALYPERFVGEIERTLKPNGVC 176

Query: 203 YVLVG---------ECGISEVMEVVRLFRNSKLVSSDKVTLSGM 237
            + V             +  V  +V +F+NS LV    V   G+
Sbjct: 177 VLHVALSRRADKYSANDLFSVEPLVAMFKNSALVHVRSVDGFGL 220


>Glyma09g34740.1 
          Length = 254

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 10/165 (6%)

Query: 83  LHKKNHRLWSSRAWNTTVHSFSXX-XXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGV 141
           L+ K  ++W++R W+  +  F+             +N S+ALC+ A  G EV AL  +GV
Sbjct: 72  LNPKLRKIWTTRDWDRKIPVFARFFEDLKVNKKLLKNTSKALCIGARVGQEVEALRQIGV 131

Query: 142 EDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARFDEALFPARFAAEMERVVRPGGA 201
            D  G++L+  PPLV + D HN PF ++ FD  F+  FD AL+P RF AE+ER ++P G 
Sbjct: 132 VDSVGMDLVPYPPLVMKGDFHNQPFQNDTFDFEFSNVFDHALYPQRFVAEIERTLKPEGV 191

Query: 202 CYVLVG---------ECGISEVMEVVRLFRNSKLVSSDKVTLSGM 237
           C + V             +  V  +V LF+ S LV    V   G+
Sbjct: 192 CVLHVALSRRADKYSANDLYSVQPLVELFKRSALVHVRSVDGFGL 236


>Glyma10g11630.1 
          Length = 152

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 69/155 (44%), Gaps = 6/155 (3%)

Query: 22  KEIDTFLKKLSFGXXXXXXXXXXXXXXHTPDTCIPTHAPPHPPLRFPKSPCDYPPTRPHL 81
           + I  FLK LSF                  DT  P H P    L FPKS C++  T P +
Sbjct: 1   RLIVKFLKCLSFVAIAVTSLTLLFLFLCMLDTYNPHHVPQKLHLCFPKSTCNFSSTHP-M 59

Query: 82  PLHKKNHRLWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGV 141
            L +      +   +N  +  F              NHSR LCV   + H+VA L    +
Sbjct: 60  SLPRS-----TPCTFNPLLFFFLLFRDHLLLCFTAFNHSRVLCVFVSSSHKVAMLRRFDI 114

Query: 142 EDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFT 176
            DVTG E+L+S  LV  ADPHNL FFD  F L F+
Sbjct: 115 HDVTGFEILESLSLVKHADPHNLLFFDGTFHLTFS 149


>Glyma11g29710.1 
          Length = 442

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 2/112 (1%)

Query: 91  WSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVELL 150
           +S   W  +V  ++              +SRALC+   +G +V AL  +GV D  G+   
Sbjct: 68  YSGMNWRRSVEHYAAVFQDLIAEGFLSPNSRALCIDTPSGEDVLALKEVGVIDSVGIFKK 127

Query: 151 DSPPLVSRADPHNLPFFDEAFDLAFTAR--FDEALFPARFAAEMERVVRPGG 200
            SPPL+   DP   PF  +AFD  F+     + +  PA FAAE+ R +RPGG
Sbjct: 128 PSPPLILHGDPRRHPFSGDAFDFEFSGNGGLERSPRPAEFAAEVCRTLRPGG 179


>Glyma18g06390.1 
          Length = 464

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)

Query: 129 AGHEVAALSLLGVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTAR--FDEALFPA 186
           +G +V AL  +GV D  G+    SPP++   D    PF  +AFD  F+     +++   A
Sbjct: 99  SGEDVLALKEVGVVDSVGIFKKPSPPMILHGDARRHPFSGDAFDFEFSCNGGLEQSPRSA 158

Query: 187 RFAAEMERVVRPGGACYVLVGECGISEVMEVVRLFRNSKLVSSDKV-TLSGMRMTSILMR 245
            FAAE+ R +RPGG   V V           + LF   +L+ + ++ ++    +  ILM+
Sbjct: 159 EFAAEICRTLRPGGFAAVHVAVRDAYSFESFLELFDCFELIRTGEINSVDSSPVLEILMK 218

Query: 246 TRQST 250
            +   
Sbjct: 219 KKNKN 223


>Glyma01g31900.1 
          Length = 464

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%)

Query: 91  WSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVELL 150
           ++S+ W   V  +S               ++ALCV    G +V AL  +GV D  G+   
Sbjct: 81  YASKEWINGVRFYSSAFQDMISGGFLSPAAKALCVETPTGRDVMALRGIGVIDAVGISKK 140

Query: 151 DSPPLVSRADPHNLPFFDEAFDLAFTARFD 180
            SPPLV   +   +PF D+ FD  + +  D
Sbjct: 141 ASPPLVKSGEARRIPFADDTFDFIYNSFVD 170


>Glyma19g36500.1 
          Length = 467

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 120 SRALCVSAGAGHEVAALSLLGV-EDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTAR 178
           +++LCV  G+   V A+  LG    V+ V+         R +  N+ + D +FD  F+  
Sbjct: 106 AKSLCVGEGSSMAVTAMKQLGFFSSVSAVQ-------THRFEQRNVLYEDNSFDFVFSRD 158

Query: 179 FDEALFPARFAAEMERVVRPGGACYVLVG 207
            D+   PA    E+ERV++PGG    LVG
Sbjct: 159 LDKVSVPALLVLEVERVLKPGGVGVFLVG 187


>Glyma18g43970.1 
          Length = 409

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 39/88 (44%)

Query: 90  LWSSRAWNTTVHSFSXXXXXXXXXXXXRNHSRALCVSAGAGHEVAALSLLGVEDVTGVEL 149
           L++S+ W   V  +S               S+ LCV    G +V AL  +GV+D  G+  
Sbjct: 81  LYTSKDWINGVRFYSSAFQDLIAGGYLSPESKTLCVETPTGRDVFALREIGVKDAVGIAR 140

Query: 150 LDSPPLVSRADPHNLPFFDEAFDLAFTA 177
             + PLV       +PF D AFD  F+ 
Sbjct: 141 KAAKPLVKFGRGERIPFGDGAFDFVFSG 168


>Glyma03g33760.1 
          Length = 460

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 120 SRALCVSAGAGHEVAALSLLGVEDVTGVELLDSPPLVSRADPHNLPFFDEAFDLAFTARF 179
           +++LCV  G+   V A+  LG   V+ V+         R    N+ + D +FD  F+   
Sbjct: 106 AKSLCVGEGSSMAVTAMKQLGFSSVSAVQ-------THRFVQRNVLYEDNSFDFVFSRDL 158

Query: 180 DEALFPARFAAEMERVVRPGGACYVLVG 207
           D+   PA    E+ERV++P G    LVG
Sbjct: 159 DKVSVPALLVLEVERVLKPRGIGAFLVG 186