Miyakogusa Predicted Gene

Lj0g3v0126039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126039.1 tr|B9GWI4|B9GWI4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_554365 PE=4
SV=1,45.45,9e-19,seg,NULL,CUFF.7565.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g01760.1                                                       137   2e-33
Glyma05g37840.1                                                       137   3e-33

>Glyma08g01760.1 
          Length = 377

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/120 (63%), Positives = 85/120 (70%), Gaps = 11/120 (9%)

Query: 1   MVESMAATSLLGHRPICEGNLIRDVSGKRKSFNSCCRFPAVEFL-GGRIVVAQPLPKSKH 59
           MVES+AATSLLGHRPIC G+L RDVS KRKS N+  RFP  EFL GGRIVV+  LPKS  
Sbjct: 1   MVESIAATSLLGHRPICGGSLTRDVSAKRKSLNT-VRFPTTEFLGGGRIVVSLALPKSDK 59

Query: 60  GXXXXXXXXXIKALAVELTREAHSYQEERLPEKDXXXXXXXXKIDSGFDPRPSLWPPANR 119
                     IKALAVELTREAH+Y+E++LP +D        KID GFD RP LWPPANR
Sbjct: 60  --QDRFVFSSIKALAVELTREAHAYREKKLPNRD-------NKIDRGFDQRPDLWPPANR 110


>Glyma05g37840.1 
          Length = 377

 Score =  137 bits (344), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 84/120 (70%), Gaps = 11/120 (9%)

Query: 1   MVESMAATSLLGHRPICEGNLIRDVSGKRKSFNSCCRFPAVEFL-GGRIVVAQPLPKSKH 59
           MVES+AATSLLGHRPIC GNL RDVS KRKS N+  RFP  EFL GGRIVV+  LPKS  
Sbjct: 1   MVESIAATSLLGHRPICGGNLTRDVSVKRKSLNT-VRFPTTEFLGGGRIVVSLALPKSDK 59

Query: 60  GXXXXXXXXXIKALAVELTREAHSYQEERLPEKDXXXXXXXXKIDSGFDPRPSLWPPANR 119
                     IKALAVELTREAH+Y+EE+LP +D        KID GFD RP  WPPANR
Sbjct: 60  --QDRFVFSSIKALAVELTREAHAYREEKLPNRD-------TKIDRGFDQRPDSWPPANR 110