Miyakogusa Predicted Gene
- Lj0g3v0125429.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0125429.1 Non Chatacterized Hit- tr|D7KKK6|D7KKK6_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,46.9,5e-19,
,CUFF.7516.1
(126 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g26630.3 189 9e-49
Glyma03g26630.2 188 9e-49
Glyma03g26630.1 188 9e-49
>Glyma03g26630.3
Length = 328
Score = 189 bits (479), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 101/126 (80%)
Query: 1 MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
MSEE S AMDLL Q EDILE DALIDELGFIHPSQF++L EES +S+NLSDEAIHQS
Sbjct: 1 MSEESHSNVEAMDLLRQFEDILEFDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQS 60
Query: 61 TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
+ + SE SKQ+NLYFWNRDHKLGIST ++PLYRAAKH FMTTL QYR C QSDKV
Sbjct: 61 ADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKV 120
Query: 121 VSCLPA 126
CLPA
Sbjct: 121 GICLPA 126
>Glyma03g26630.2
Length = 433
Score = 188 bits (478), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 101/126 (80%)
Query: 1 MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
MSEE S AMDLL Q EDILE DALIDELGFIHPSQF++L EES +S+NLSDEAIHQS
Sbjct: 1 MSEESHSNVEAMDLLRQFEDILEFDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQS 60
Query: 61 TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
+ + SE SKQ+NLYFWNRDHKLGIST ++PLYRAAKH FMTTL QYR C QSDKV
Sbjct: 61 ADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKV 120
Query: 121 VSCLPA 126
CLPA
Sbjct: 121 GICLPA 126
>Glyma03g26630.1
Length = 433
Score = 188 bits (478), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 101/126 (80%)
Query: 1 MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
MSEE S AMDLL Q EDILE DALIDELGFIHPSQF++L EES +S+NLSDEAIHQS
Sbjct: 1 MSEESHSNVEAMDLLRQFEDILEFDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQS 60
Query: 61 TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
+ + SE SKQ+NLYFWNRDHKLGIST ++PLYRAAKH FMTTL QYR C QSDKV
Sbjct: 61 ADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKV 120
Query: 121 VSCLPA 126
CLPA
Sbjct: 121 GICLPA 126