Miyakogusa Predicted Gene

Lj0g3v0125429.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125429.1 Non Chatacterized Hit- tr|D7KKK6|D7KKK6_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,46.9,5e-19,
,CUFF.7516.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g26630.3                                                       189   9e-49
Glyma03g26630.2                                                       188   9e-49
Glyma03g26630.1                                                       188   9e-49

>Glyma03g26630.3 
          Length = 328

 Score =  189 bits (479), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 92/126 (73%), Positives = 101/126 (80%)

Query: 1   MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
           MSEE  S   AMDLL Q EDILE DALIDELGFIHPSQF++L EES +S+NLSDEAIHQS
Sbjct: 1   MSEESHSNVEAMDLLRQFEDILEFDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQS 60

Query: 61  TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
            + +  SE  SKQ+NLYFWNRDHKLGIST  ++PLYRAAKH FMTTL QYR C  QSDKV
Sbjct: 61  ADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKV 120

Query: 121 VSCLPA 126
             CLPA
Sbjct: 121 GICLPA 126


>Glyma03g26630.2 
          Length = 433

 Score =  188 bits (478), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 92/126 (73%), Positives = 101/126 (80%)

Query: 1   MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
           MSEE  S   AMDLL Q EDILE DALIDELGFIHPSQF++L EES +S+NLSDEAIHQS
Sbjct: 1   MSEESHSNVEAMDLLRQFEDILEFDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQS 60

Query: 61  TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
            + +  SE  SKQ+NLYFWNRDHKLGIST  ++PLYRAAKH FMTTL QYR C  QSDKV
Sbjct: 61  ADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKV 120

Query: 121 VSCLPA 126
             CLPA
Sbjct: 121 GICLPA 126


>Glyma03g26630.1 
          Length = 433

 Score =  188 bits (478), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 92/126 (73%), Positives = 101/126 (80%)

Query: 1   MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQS 60
           MSEE  S   AMDLL Q EDILE DALIDELGFIHPSQF++L EES +S+NLSDEAIHQS
Sbjct: 1   MSEESHSNVEAMDLLRQFEDILEFDALIDELGFIHPSQFALLKEESYISSNLSDEAIHQS 60

Query: 61  TNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKV 120
            + +  SE  SKQ+NLYFWNRDHKLGIST  ++PLYRAAKH FMTTL QYR C  QSDKV
Sbjct: 61  ADGVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHVFMTTLKQYRMCDNQSDKV 120

Query: 121 VSCLPA 126
             CLPA
Sbjct: 121 GICLPA 126