Miyakogusa Predicted Gene

Lj0g3v0125289.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125289.2 tr|G7L0K5|G7L0K5_MEDTR Nuclear pore complex
protein Nup205 OS=Medicago truncatula GN=MTR_7g099880
PE,84.86,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF3414,Protein of unknown function DUF34,CUFF.7507.2
         (1539 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g29610.1                                                      1410   0.0  
Glyma06g29570.1                                                      1070   0.0  
Glyma09g16710.1                                                        87   2e-16

>Glyma06g29610.1 
          Length = 792

 Score = 1410 bits (3651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/840 (83%), Positives = 739/840 (87%), Gaps = 49/840 (5%)

Query: 1   MVSPKHLLSTLESVLLAPTPPTAAQRVELFHAIRSSLHSFQSLLSYPPPKPSDRSQVQSK 60
           MVSPK LL T+ES LL  +PP AA RVEL HA+R+S  S QSLLSYPPPKPSDRSQVQSK
Sbjct: 1   MVSPKQLLGTIESALLGTSPPMAAHRVELLHALRTSRTSLQSLLSYPPPKPSDRSQVQSK 60

Query: 61  SIRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAA 120
           S+RLPDSPPISLDDQDV IALKLSDDLHLNEVDCVRLLVSAN+EWGLMGREPLEILRLAA
Sbjct: 61  SVRLPDSPPISLDDQDVHIALKLSDDLHLNEVDCVRLLVSANKEWGLMGREPLEILRLAA 120

Query: 121 GLWYTERRDLITSLHLLLRAVVLDQGLEDDVLVDIQKYLEDLINSGLRQRLISLIKELNR 180
           GLWYTERRDLITSLHLLLRAVVLDQGL+DD+LVDIQKYLEDLI+SGLRQRLISLIKELNR
Sbjct: 121 GLWYTERRDLITSLHLLLRAVVLDQGLQDDILVDIQKYLEDLISSGLRQRLISLIKELNR 180

Query: 181 EEPSGFGGPQCERYIIDSRGSLVERLAVVSRERLILGHCLVLSILVVRTSPKDVKDIFSV 240
           EEPSG GGPQCE Y++DSRGSLVER AVVSRERLILGHCLVLSILVVRT PKD+KDIFSV
Sbjct: 181 EEPSGLGGPQCESYVLDSRGSLVERQAVVSRERLILGHCLVLSILVVRTCPKDIKDIFSV 240

Query: 241 LKDSASEVSESIAPVKYQITFSLLFAVVIAFISDGLSTVPDKASVLSSNASFRHEFHELV 300
           LKDSASEVSES A VK+QITF LLFA+VIAF+SDGLSTVPDKASVLSSN SFRHEFHELV
Sbjct: 241 LKDSASEVSESNATVKHQITFCLLFALVIAFVSDGLSTVPDKASVLSSNTSFRHEFHELV 300

Query: 301 MAAGNDPIVEGFVGGIRLAWAVRLMLIQDGVAARETVSSGSSNEMGYLSQCLEVIFSNNN 360
           M  GNDP VEGFVGGIRLAW V LMLIQDGV ARET+SSGSSNE+GYLSQCLE IFSNN 
Sbjct: 301 MTTGNDPHVEGFVGGIRLAWVVHLMLIQDGVPARETISSGSSNELGYLSQCLEAIFSNNV 360

Query: 361 FQFLLDKVLRTAAYQTEDEDMVYMYNAYLHKLITCFLSNPLARDKIKESKEKIMSVLSPY 420
           FQFLLDKVLRTA++Q                              IKESKE+IMSVLSPY
Sbjct: 361 FQFLLDKVLRTASFQ------------------------------IKESKERIMSVLSPY 390

Query: 421 RSVGTHDFAQDSNSSSLHGTEMGSIPFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGE 480
           R VG+HDFAQDSNSSSLHGTEMG +PFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGE
Sbjct: 391 RVVGSHDFAQDSNSSSLHGTEMGPLPFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGE 450

Query: 481 DHTNFRTLVAFLNMLSTLASSQEGASKVYELLQNKSFRSIGWSTLFECLTIYDEKFKQSL 540
           DHTNF+TLVAFLNMLSTLA SQEGASKVYELLQ K+FRSIGWSTLFECLTIYDEKFKQSL
Sbjct: 451 DHTNFQTLVAFLNMLSTLACSQEGASKVYELLQGKAFRSIGWSTLFECLTIYDEKFKQSL 510

Query: 541 QTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNPIEKKNWFPDIEPLFKLLSYENVPPYL 600
           QTAGAMLPEIQEGDAKALVAYLN+LKKVVENGNP E+K WFPDIEPLFKLLSYENVPPYL
Sbjct: 511 QTAGAMLPEIQEGDAKALVAYLNILKKVVENGNPTERKTWFPDIEPLFKLLSYENVPPYL 570

Query: 601 KGALRNAIATFIHVSPVLKDSIWTYLEQYDLPVVVGPDVQNTP-SVGTQVYDMQFELNEI 659
           KGALRNAIATFI VSPVLKDSIWTYLEQYDLPVVVG D+ N+P S+GTQVYDMQFELNEI
Sbjct: 571 KGALRNAIATFIKVSPVLKDSIWTYLEQYDLPVVVGLDIPNSPQSMGTQVYDMQFELNEI 630

Query: 660 EARREQYPSTISFLNLINALIAEERDLTDXXXXXXXXXXXXYDHVFGPFPQRAYTDTCEK 719
           EARREQYPSTISFLNLINALIAEERDL+D            YDH                
Sbjct: 631 EARREQYPSTISFLNLINALIAEERDLSDRGRRFIGIFRFIYDH---------------- 674

Query: 720 WQLVGACLKHFHMILSMYDIKDEDYEGVVDQSRLSTTKESSPLQTQLPVLELMKDFMSGK 779
             LVGACLKHFHM+LSMYDIKDEDYEGVVDQSRLS TKESSPLQTQLPVLEL+KDFMSGK
Sbjct: 675 --LVGACLKHFHMVLSMYDIKDEDYEGVVDQSRLSATKESSPLQTQLPVLELLKDFMSGK 732

Query: 780 TAFRNIMSILLLGVNSIIAERSSQIYGQHLENAVQLSLEIIILVLEKDLLLSDYWRPLYQ 839
           TAFRNIMSILL GVNS+IAERSSQ+YGQ LENAVQLSLEIIILVL+KDLLLSDYWRPLYQ
Sbjct: 733 TAFRNIMSILLPGVNSVIAERSSQLYGQLLENAVQLSLEIIILVLDKDLLLSDYWRPLYQ 792


>Glyma06g29570.1 
          Length = 828

 Score = 1070 bits (2766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/689 (78%), Positives = 571/689 (82%), Gaps = 40/689 (5%)

Query: 880  SRMVGLVQLLLKSNASNSLIEDYAACLELRSEESQKVENNNDS-GILIMQLLIDNIGRPA 938
            SRMVGLVQLLLKSNASNSLIEDYAACLELRSEE Q +ENNND  GILIMQLLIDNI RPA
Sbjct: 18   SRMVGLVQLLLKSNASNSLIEDYAACLELRSEELQNLENNNDDPGILIMQLLIDNISRPA 77

Query: 939  PNITHLLLKFDIDTPVERTVLQPKFYYSCMKVVLDILEKLSKPDVNALLHEFGFQLFYEL 998
            PNITHLLLKFD+DTP+ERTVLQPKFYYSCMKV+LDILEKL KP VNALLHEFGFQL YEL
Sbjct: 78   PNITHLLLKFDLDTPIERTVLQPKFYYSCMKVILDILEKLLKPGVNALLHEFGFQLLYEL 137

Query: 999  CVDPLTCFPTMDLLSNKKYQFFVKHLDTIGIAPLPKRNSNQPLRISSLHQRAWILKLLAV 1058
            CVDPLT  PTMDLLSNKKY FFVKHLDTIGIAPLPKRNSNQ LR SSLHQRAW+LKLLAV
Sbjct: 138  CVDPLTSGPTMDLLSNKKYLFFVKHLDTIGIAPLPKRNSNQSLRNSSLHQRAWLLKLLAV 197

Query: 1059 ELHAGDVSSSKHREACQTILSHLYGQGITEIG---------GGQAISQ---------FSL 1100
            ELHAGDV SS HREACQTILS+L+      IG             I+          F+ 
Sbjct: 198  ELHAGDVRSSNHREACQTILSYLFAHVAPIIGYNLNNILFSNSSTIASSNSKSFSPVFTK 257

Query: 1101 QGASEN--------------------AAIRTVSKSKVLELLEIIQFRCPDSTTKLSNVVA 1140
               S N                         V+K +VLELLEIIQFRCPDSTT+LSN+VA
Sbjct: 258  SKPSTNFKNMVVLQPHPTMSLYTVAVGGTSIVTKKRVLELLEIIQFRCPDSTTQLSNIVA 317

Query: 1141 GMKYDLLPEDILGNPGNSGNG-VYYYSERGDRLIDLASFHDKLWLKYNSAYQHGSNLGSD 1199
            GMKYDL  EDILGNPGNSG G VYYYSERGDRLIDLASFHDKLW KYNSAY   SNLGS+
Sbjct: 318  GMKYDLPAEDILGNPGNSGKGGVYYYSERGDRLIDLASFHDKLWQKYNSAYAQASNLGSE 377

Query: 1200 IELNDVRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSASRRLTMLEDRSEILF 1259
            +ELN+VRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSASRRLTMLEDRSEILF
Sbjct: 378  VELNNVRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSASRRLTMLEDRSEILF 437

Query: 1260 QVXXXXXXXXXXXXXXXKMAFILSQVALTCMAKLRDERFMFPGSLSSDNITCIDLIVVKQ 1319
            QV               +MAFILSQVALTCMAKLRDERF+FPGSLSSDNITC+DLIVVKQ
Sbjct: 438  QVLDVSLSASASPDCSLRMAFILSQVALTCMAKLRDERFLFPGSLSSDNITCLDLIVVKQ 497

Query: 1320 LSNGACLTILFKLIMAIXXXXXXXXXXXXQYALLLSYFQYCLNVVDPDVPTSVLQFLLLN 1379
            LSNGACLTILFKLIMAI            QYALLLSYFQYC NVVDPDVPT+VLQFLLL+
Sbjct: 498  LSNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCQNVVDPDVPTTVLQFLLLS 557

Query: 1380 EQDSEHIDLPKIDNEQAELARANFSTLRKEAQSILDLVVKDATHGSEPGKTIALYVLDGL 1439
            EQD+E+IDLPKID EQAELARANFSTLRKEAQSIL+LVVKDATHGSEPGKTI+LYVLD L
Sbjct: 558  EQDNEYIDLPKIDKEQAELARANFSTLRKEAQSILNLVVKDATHGSEPGKTISLYVLDAL 617

Query: 1440 ICIDHERYFLSQLQSRGFLRSCFTAISSVSNQDGGLSLDSLQRACTFEAELALLLRISHK 1499
            I IDHER+FLSQLQSRGFLRSCFTAIS+V NQDG LSLDSLQRACTFEAELALLLRISHK
Sbjct: 618  INIDHERFFLSQLQSRGFLRSCFTAISNVCNQDGSLSLDSLQRACTFEAELALLLRISHK 677

Query: 1500 YGKSGAQVLFSMGIFEHLASGRAINLQVS 1528
            YGKSGAQ+LFSMGI EHLASGRAINLQ S
Sbjct: 678  YGKSGAQILFSMGILEHLASGRAINLQGS 706


>Glyma09g16710.1 
          Length = 101

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 44/50 (88%)

Query: 258 QITFSLLFAVVIAFISDGLSTVPDKASVLSSNASFRHEFHELVMAAGNDP 307
           QITF LLFA+VIAF+SDGLST+PDKASVLSSN SFR EF ELVM  GNDP
Sbjct: 4   QITFCLLFALVIAFVSDGLSTMPDKASVLSSNTSFRLEFRELVMTTGNDP 53