Miyakogusa Predicted Gene

Lj0g3v0125279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125279.1 Non Chatacterized Hit- tr|I1L2W3|I1L2W3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,89.86,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.7551.1
         (691 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g22260.1                                                      1172   0.0  

>Glyma09g22260.1 
          Length = 1616

 Score = 1172 bits (3031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/662 (85%), Positives = 589/662 (88%), Gaps = 10/662 (1%)

Query: 40  RNNRHKPDDLLREPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQFPDQDQFRSVTEAI 99
           RN+R KPDD LR+PPNKTQKRVHALNRELPPPNEQFILDFEQLQSQ  DQDQ RSVTEAI
Sbjct: 1   RNSRQKPDDSLRDPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQCADQDQLRSVTEAI 60

Query: 100 LISLVVQCSGHGPRSDFLLYVLRTLCGIGCINWDXXXXXXXXXXXXXXXPVGQMSQAVPT 159
           LISLVVQCSGHGPR+DFLL+VLR+LCGIGCINWD               PVGQ+SQAVPT
Sbjct: 61  LISLVVQCSGHGPRADFLLFVLRSLCGIGCINWDSLLPSLLSSVSSAELPVGQLSQAVPT 120

Query: 160 VXXXXXXXXGMLPPQGTVANS-NFQSLNPASPLTSVHSIGSPAQPTIESLSYATLSPVKX 218
           V        GMLPP  T+ANS NFQS NPASPLTSVH+IGSPAQ T+E LS A +SPVK 
Sbjct: 121 VSSSSLSQTGMLPPPSTIANSSNFQSSNPASPLTSVHTIGSPAQSTMEPLSCAAMSPVKS 180

Query: 219 XXXXXXXXXXKLRGSPSVRNNDISNSSLRQLCCKIILTGLEVSLKPVTYAEIFHHMLNWL 278
                     KLRGSPSVR NDISNSSLRQLCCKIILTGLE SLKPVTYAEIF++MLNWL
Sbjct: 181 SDISSAGQQSKLRGSPSVRTNDISNSSLRQLCCKIILTGLEFSLKPVTYAEIFNYMLNWL 240

Query: 279 VNWDQRQQGVDETDILKSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFI 338
           VNWDQRQQG+DE+D++KSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFI
Sbjct: 241 VNWDQRQQGIDESDVIKSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFI 300

Query: 339 ENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTTPNISGEAAAHL 398
           ENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQT PN+SGEA AHL
Sbjct: 301 ENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTIPNVSGEAVAHL 360

Query: 399 RLSPISYLSVLGEPLHAEDITNSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPC 458
           RLSPI+YLSVLGEPLH EDI +SIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPC
Sbjct: 361 RLSPITYLSVLGEPLHGEDIASSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPC 420

Query: 459 YRPSSQAPTAGAVFSSEMICEATIDRIVELLKLTNSE---------INCWQDWLVFSDIF 509
           YR SSQ PTAGAVFSSEMICEATIDRIVELLK+TNS          INCWQDWLVFSDIF
Sbjct: 421 YRNSSQGPTAGAVFSSEMICEATIDRIVELLKMTNSGNNLLSLSLYINCWQDWLVFSDIF 480

Query: 510 YFLVKSGCIDFVDFVDKLVSRLTEGDQHILKTNHVTWLLAQIIRIELVMNALNLDSRKVE 569
           YFL+KSGCIDFVDFVDKLVSRLTEGD HILKTNHVTWLLAQIIRIELVMNALN D RKVE
Sbjct: 481 YFLIKSGCIDFVDFVDKLVSRLTEGDHHILKTNHVTWLLAQIIRIELVMNALNSDPRKVE 540

Query: 570 TTRKILSFHREDRSSDPNNPQSILLEFVSSCQNLRIWSLNTTAREYLNSEQLQKGKQIDE 629
           TTRKILSFHREDRSSDPNNPQSILL+FVSSCQNLRIWSLN++ REYLN+EQLQKGKQIDE
Sbjct: 541 TTRKILSFHREDRSSDPNNPQSILLDFVSSCQNLRIWSLNSSTREYLNNEQLQKGKQIDE 600

Query: 630 WWRQASKGDRMMDYMNMDERSIGMFWVVTYTMAQPACETVMNWLTSAGVIDLLPGPNLQS 689
           WWRQASKG+RMMDYMNMDERSIGMFWVVTYTMAQPACETVMNWL SAGV DLLPG NLQ 
Sbjct: 601 WWRQASKGERMMDYMNMDERSIGMFWVVTYTMAQPACETVMNWLNSAGVADLLPGANLQQ 660

Query: 690 AE 691
           AE
Sbjct: 661 AE 662