Miyakogusa Predicted Gene

Lj0g3v0124769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124769.1 Non Chatacterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.33,1e-18,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.7486.1
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g10360.1                                                       157   7e-39
Glyma08g43240.1                                                       126   1e-29
Glyma09g00860.1                                                        57   7e-09
Glyma07g39280.1                                                        55   2e-08
Glyma09g00870.1                                                        55   4e-08
Glyma15g11710.1                                                        52   2e-07
Glyma17g01460.1                                                        52   2e-07

>Glyma18g10360.1 
          Length = 154

 Score =  157 bits (396), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/167 (53%), Positives = 100/167 (59%), Gaps = 14/167 (8%)

Query: 1   MGFLKVIFIIATTMALSIAALVTMKSITTEGEAKP-FVPSQKQVPFAHEKNILLPSKRVN 59
           MGFLK IFIIA TMALSI   +TMK+IT + EAKP FV         H+KN+LLPSKRV+
Sbjct: 1   MGFLKAIFIIAITMALSIT--LTMKTITHQEEAKPPFVHHDLPSSTPHQKNLLLPSKRVS 58

Query: 60  RFLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYDKHNCGA 119
           RFLAQ                 HC+KD+EIC               KC+DV YDKHNCGA
Sbjct: 59  RFLAQ---------VKNPNAADHCRKDHEICTLSGVKNSTCCNN--KCIDVGYDKHNCGA 107

Query: 120 XXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
                       RG+CVD NFDKRHCG CN+RCE G YC YGMCGYA
Sbjct: 108 CKMKCKFTEVCCRGECVDTNFDKRHCGECNHRCEVGAYCVYGMCGYA 154


>Glyma08g43240.1 
          Length = 134

 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 88/166 (53%), Gaps = 32/166 (19%)

Query: 1   MGFLKVIFIIATTMALSIAALVTMKSITTEGEAKPFVPSQKQVPFAHEKNILLPSKRVNR 60
           MGFLK IF+IA TMALSIA  +TMK+IT + EAKP                   + RV+R
Sbjct: 1   MGFLKAIFVIAITMALSIA--LTMKTITHQEEAKP-------------------AFRVSR 39

Query: 61  FLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYDKHNCGAX 120
           FLAQ                 HC KD+E+C               KC+DV YD HNCGA 
Sbjct: 40  FLAQ---------VKNPNAADHCHKDHEVCTLVGAKNSTCCNN--KCIDVGYDYHNCGAC 88

Query: 121 XXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
                      RG+CV+ NFDKRHCG CN+RCE G YC YGMCGYA
Sbjct: 89  KMKCKLTDACCRGECVNTNFDKRHCGECNHRCEVGAYCVYGMCGYA 134


>Glyma09g00860.1 
          Length = 131

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%)

Query: 106 KCMDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGY 165
           KC++VS D++NCG             +G+CV+  FDK HCG C N+C  G  C +G+C Y
Sbjct: 71  KCVNVSNDRNNCGMCGKRCKYSQVCCKGKCVNPMFDKHHCGKCGNKCNKGDACVFGLCSY 130

Query: 166 A 166
           A
Sbjct: 131 A 131


>Glyma07g39280.1 
          Length = 114

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 15/113 (13%)

Query: 54  PSKRVNRFLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYD 113
           P  ++NRFL+ +              V+ C+K  E+C               KC+++S D
Sbjct: 17  PKGKINRFLSDRV-------------VLTCEKYPEVC--LIKGSAGSDCCKNKCVNLSTD 61

Query: 114 KHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
             NCG              G+CV+   +++HCG C+N+C +   C YGMC YA
Sbjct: 62  VSNCGKCGKKCSYGKICCEGKCVNPRTNEKHCGKCDNKCNSESSCIYGMCSYA 114


>Glyma09g00870.1 
          Length = 131

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 35/166 (21%)

Query: 1   MGFLKVIFIIATTMALSIAALVTMKSITTEGEAKPFVPSQKQVPFAHEKNILLPSKRVNR 60
           M  LK +F++A  MAL+I  L +  S+ TE E K                     +  +R
Sbjct: 1   MKSLKTLFLVALLMALAITQL-SATSLETE-EPKSL-------------------RGTSR 39

Query: 61  FLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYDKHNCGAX 120
           FL++K               + C K+ +IC               KC++ S D+ NCG  
Sbjct: 40  FLSKKRV------------ALTCDKNPKIC--LIKGSAGPNCCSNKCVNFSTDRLNCGRC 85

Query: 121 XXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
                      +G+CV+   +++HCG C N+C     C  GMC YA
Sbjct: 86  GKKCSFGKICCQGKCVNPKTNEKHCGKCGNKCNAKGSCVLGMCSYA 131


>Glyma15g11710.1 
          Length = 131

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 35/166 (21%)

Query: 1   MGFLKVIFIIATTMALSIAALVTMKSITTEGEAKPFVPSQKQVPFAHEKNILLPSKRVNR 60
           M  LK +F++A    L I AL    S T+         SQ + P +         +  +R
Sbjct: 1   MKSLKTLFLVA----LLIMALAITLSATS---------SQTEEPKSL--------RGTSR 39

Query: 61  FLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYDKHNCGAX 120
           FL+QK               + C K+ +IC               KC++ S D+ NCG  
Sbjct: 40  FLSQKRV------------ALTCDKNPKIC--LVKGSAGPNCCSNKCVNFSTDRLNCGRC 85

Query: 121 XXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
                       G+CV+   +++HCG C N+C     C +GMC YA
Sbjct: 86  GKKCSFGKICCEGKCVNPKTNEKHCGKCGNKCNAKGSCVFGMCSYA 131


>Glyma17g01460.1 
          Length = 125

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 15/113 (13%)

Query: 54  PSKRVNRFLAQKXXXXXXXXXXXXXXVVHCQKDNEICAXXXXXXXXXXXXXXKCMDVSYD 113
           P  ++NRFL+ +              V+ C K  ++C               KC+++S D
Sbjct: 28  PKGKINRFLSDRV-------------VLKCDKYPKVC--HIKGSAGSDCCKNKCVNLSTD 72

Query: 114 KHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGACNNRCETGQYCTYGMCGYA 166
             NCG              G+CV+   +++HCG C N+C +   C YGMC YA
Sbjct: 73  VSNCGKCGKKCSYGKICCEGKCVNPRTNEKHCGKCGNKCNSESSCIYGMCSYA 125