Miyakogusa Predicted Gene

Lj0g3v0123219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0123219.1 Non Chatacterized Hit- tr|A5BE80|A5BE80_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,54.17,3e-18,seg,NULL; LEA_6,Late embryogenesis abundant protein,
LEA-18,CUFF.7382.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g17860.1                                                       105   1e-23
Glyma05g22030.1                                                       103   4e-23

>Glyma17g17860.1 
          Length = 95

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 61/91 (67%), Gaps = 6/91 (6%)

Query: 3  KETKAQSESGKGGASIEGLPFEDSPYVQYKDLEDYKRQGYGTEGHQEPKPGRGAGATEAP 62
          KETKAQS+     +S EGLP EDSPYV+YKDLEDYKRQGYGT+GHQEPK GRGAGATEAP
Sbjct: 11 KETKAQSDESVKESSTEGLPMEDSPYVKYKDLEDYKRQGYGTQGHQEPKTGRGAGATEAP 70

Query: 63 TLXXXXXXXXXXXXXXXXPTGTGATNRQGVP 93
          TL                   T A N +GVP
Sbjct: 71 TLSGAAVSSDAQV------AATDAINSKGVP 95


>Glyma05g22030.1 
          Length = 92

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/90 (63%), Positives = 62/90 (68%), Gaps = 7/90 (7%)

Query: 3  KETKAQSESGKGGASIEGLPFEDSPYVQYKDLEDYKRQGYGTEGHQEPKPGRGAGATEAP 62
          KETK Q+ESGK  +S EGLP EDSPYV+YKDLEDYKRQGYG +GHQEPKPGRGAGATEAP
Sbjct: 9  KETKPQNESGKE-SSTEGLPMEDSPYVKYKDLEDYKRQGYGAQGHQEPKPGRGAGATEAP 67

Query: 63 TLXXXXXXXXXXXXXXXXPTGTGATNRQGV 92
          TL                 T T   N +GV
Sbjct: 68 TLSGAAVSSDAQA------TATDVINSKGV 91