Miyakogusa Predicted Gene

Lj0g3v0122549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0122549.1 tr|G7JEE0|G7JEE0_MEDTR Sister chromatid cohesion
protein PDS5-like protein OS=Medicago truncatula
GN,45.97,0.00000000000001, ,CUFF.7322.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g02700.1                                                       104   2e-23
Glyma07g02700.2                                                       104   2e-23

>Glyma07g02700.1 
          Length = 865

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 83/116 (71%), Gaps = 6/116 (5%)

Query: 3   KEGNLNPLLDKTLPKSPDVGLEKESDEKPQP---PIRKIKFTLKSNGGTGVAPELVDANV 59
           KE NLN LL+KT   SP V LEKES+ +      PIRKIKF+++ +G   VAPE V A  
Sbjct: 718 KEDNLNSLLEKTSLDSPAVRLEKESEVRKDSEIKPIRKIKFSVRVDGKL-VAPESV-AKR 775

Query: 60  EPKVSCEDEGRNKSAMNVEVENREEARSSGQPEVKKRRRHDDATPNKGLNKSSVVK 115
           EP  SC  EG++KS +N+E+EN EE+RSS Q +VKKRRR  +ATPNKG+NKSS VK
Sbjct: 776 EPSASCGYEGKHKSFVNIELENIEESRSSAQTDVKKRRRL-NATPNKGVNKSSAVK 830


>Glyma07g02700.2 
          Length = 710

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 83/116 (71%), Gaps = 6/116 (5%)

Query: 3   KEGNLNPLLDKTLPKSPDVGLEKESDEKPQP---PIRKIKFTLKSNGGTGVAPELVDANV 59
           KE NLN LL+KT   SP V LEKES+ +      PIRKIKF+++ +G   VAPE V A  
Sbjct: 411 KEDNLNSLLEKTSLDSPAVRLEKESEVRKDSEIKPIRKIKFSVRVDGKL-VAPESV-AKR 468

Query: 60  EPKVSCEDEGRNKSAMNVEVENREEARSSGQPEVKKRRRHDDATPNKGLNKSSVVK 115
           EP  SC  EG++KS +N+E+EN EE+RSS Q +VKKRRR  +ATPNKG+NKSS VK
Sbjct: 469 EPSASCGYEGKHKSFVNIELENIEESRSSAQTDVKKRRRL-NATPNKGVNKSSAVK 523