Miyakogusa Predicted Gene

Lj0g3v0121929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121929.1 tr|D7LR49|D7LR49_ARALL Methyltransferase/ nucleic
acid binding protein OS=Arabidopsis lyrata subsp.
,60.27,6e-19,seg,NULL,NODE_67156_length_1648_cov_15.934466.path1.1
         (73 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g24950.1                                                       121   2e-28
Glyma08g08040.1                                                       114   3e-26

>Glyma05g24950.1 
          Length = 483

 Score =  121 bits (304), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/73 (75%), Positives = 61/73 (83%), Gaps = 1/73 (1%)

Query: 1  MWYLCVFFHRLLDYRKPEVESLAQLFGEANQNXXXXXXXXQLQWKLPLHHHPDSPFHLVN 60
          MWYLCVFFHRLLDYRKPEVESLAQLFG A ++        Q+QWKLP+H+HPDSPFH VN
Sbjct: 1  MWYLCVFFHRLLDYRKPEVESLAQLFG-ATEDPKNGDVPSQMQWKLPIHYHPDSPFHFVN 59

Query: 61 LPSEQLARDIANR 73
          LPSE+LARDIA R
Sbjct: 60 LPSEKLARDIATR 72


>Glyma08g08040.1 
          Length = 483

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 1  MWYLCVFFHRLLDYRKPEVESLAQLFGEANQNXXXXXXXXQLQWKLPLHHHPDSPFHLVN 60
          MWYLCVFFHRLLDYRKPEVESLAQLFG A ++        QLQWKLP H+H DSPFH VN
Sbjct: 1  MWYLCVFFHRLLDYRKPEVESLAQLFG-ATEDPQNGDVSSQLQWKLPHHYHADSPFHFVN 59

Query: 61 LPSEQLARDIANR 73
          LPSEQLAR+IA R
Sbjct: 60 LPSEQLARNIATR 72