Miyakogusa Predicted Gene

Lj0g3v0121289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121289.1 Non Chatacterized Hit- tr|E0VG30|E0VG30_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,38.71,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; 5-METHYLCYTOSINE G/T
MISMATCH-SPECIFIC DNA GLYCOSYLASE,NULL; coi,CUFF.7232.1
         (675 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11620.1                                                       237   3e-62

>Glyma13g11620.1 
          Length = 259

 Score =  237 bits (605), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 115/171 (67%), Positives = 130/171 (76%), Gaps = 7/171 (4%)

Query: 499 SCSEKHPPTKKVRKPPIRFSASEKRNEAYKKRTADNTWVPPRSHIHLIQEDHAFDPWRVL 558
           +CS K    K  R PP    ASEK +EAYK++T DNTW PPRS I LIQEDH  DPWRVL
Sbjct: 89  NCSNKSIEIK--RFPP----ASEKWDEAYKRKTPDNTWKPPRSEIVLIQEDHLHDPWRVL 142

Query: 559 AICMLLNLTTGRQVKEVISNFFKLCPDAETCTQVSEDEILEVIRSLGL-HKRAAMLQRFS 617
            ICMLLN T G Q K+V+SNFFKLCPDA++CTQV+ +EI + I++LG  HKRA MLQR S
Sbjct: 143 VICMLLNRTAGGQTKKVVSNFFKLCPDAKSCTQVTREEIEKTIKTLGFQHKRAEMLQRLS 202

Query: 618 REYLAENWTHVTQLHGVGKYGADAYAIFCTGKWDRVTPNDHKLVGYCKFLH 668
            EYL E+WTHVTQLHGVGKY ADAYAIF TG WDRVTP DH L  Y +FLH
Sbjct: 203 EEYLDESWTHVTQLHGVGKYAADAYAIFVTGMWDRVTPTDHMLNYYWEFLH 253