Miyakogusa Predicted Gene

Lj0g3v0120679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0120679.1 Non Chatacterized Hit- tr|K4BND7|K4BND7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,83.33,0.000000000000002,Translin,Translin; seg,NULL; TRANSLIN
ASSOCIATED FACTOR X,NULL; TRANSLIN AND TRANSLIN ASSOCIATED
PRO,CUFF.7179.1
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g01340.1                                                       172   1e-43
Glyma11g01340.2                                                       162   1e-40

>Glyma11g01340.1 
          Length = 281

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 103/136 (75%), Gaps = 5/136 (3%)

Query: 9   LHIHRVSLFMAASKPQRLFQRTDVQSSPKXXXXXXXXXXXXXXXXXXXDSFAKYAQYLND 68
           LH  R SLFMA+   +     T++QSSPK                   ++F++Y Q LND
Sbjct: 2   LHSLRFSLFMAS---KHRIAGTNIQSSPKRARTMATSSTAIEPALK--EAFSRYTQCLND 56

Query: 69  LNEKRERVVKASRDVTMNSKKVIFQVHRMSKYNKLEVLEKAEKDLAAVRDQHISRLVREL 128
           LN+KRERVVKASRDVTMNSKKVIFQVHRMSKYNK+E+LEKAEKDLAAV DQ++SRLV+EL
Sbjct: 57  LNDKRERVVKASRDVTMNSKKVIFQVHRMSKYNKVEILEKAEKDLAAVTDQYMSRLVKEL 116

Query: 129 QGTDFWKLRRAYSPGV 144
           QGTDFWKLRRAYSPG+
Sbjct: 117 QGTDFWKLRRAYSPGI 132


>Glyma11g01340.2 
          Length = 250

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 74/88 (84%), Positives = 85/88 (96%)

Query: 57  DSFAKYAQYLNDLNEKRERVVKASRDVTMNSKKVIFQVHRMSKYNKLEVLEKAEKDLAAV 116
           ++F++Y Q LNDLN+KRERVVKASRDVTMNSKKVIFQVHRMSKYNK+E+LEKAEKDLAAV
Sbjct: 14  EAFSRYTQCLNDLNDKRERVVKASRDVTMNSKKVIFQVHRMSKYNKVEILEKAEKDLAAV 73

Query: 117 RDQHISRLVRELQGTDFWKLRRAYSPGV 144
            DQ++SRLV+ELQGTDFWKLRRAYSPG+
Sbjct: 74  TDQYMSRLVKELQGTDFWKLRRAYSPGI 101