Miyakogusa Predicted Gene

Lj0g3v0120039.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0120039.2 Non Chatacterized Hit- tr|K4AY91|K4AY91_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,29.6,9e-18,
,CUFF.7146.2
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g16260.1                                                       253   1e-67
Glyma15g42810.1                                                       201   6e-52
Glyma03g25850.1                                                        63   4e-10

>Glyma08g16260.1 
          Length = 671

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/250 (56%), Positives = 173/250 (69%), Gaps = 17/250 (6%)

Query: 1   MASVLKAVAEAAEDVMKSKSSGSVFNRLGSGRNSSVDKSQLEDNFQHQEQNQSLYLQRSG 60
           MA+V+KAVAEAAEDV+KSK SGSVF+RLG   ++  D +QLED+FQHQEQ+     Q++ 
Sbjct: 249 MATVIKAVAEAAEDVIKSKPSGSVFDRLGRSMDTLDDNTQLEDSFQHQEQHHLFRSQKTE 308

Query: 61  YNGQRPANTTIMEHETGAHSDSASDNEGFHDVDVMGHRVTEISQFSSSGG---------- 110
           YNGQ  AN T+M HETG  SDS SDNEGF D++VM  RV+  SQ   S G          
Sbjct: 309 YNGQYAANMTMMGHETGYPSDSNSDNEGFDDINVMDRRVSGASQICPSAGNRGNDSLMVQ 368

Query: 111 -----NADDSLRLKRNREQEK-PVAARASHKIVNISVNVSTWKPPLYQEPSHFAQLAGHK 164
                N DDSLR KRNREQE+   ++  SHKIVNISVNV+ WKPP +QEP    +L G++
Sbjct: 369 YSVAKNVDDSLRQKRNREQEQLSTSSNTSHKIVNISVNVNAWKPPQHQEPREVTELDGNR 428

Query: 165 GSDHETGAHRSGMQLMEDNTNTSKVSNGNANPSPDVQKESSKSQLCISGSSLAGRPLEDV 224
              +E    RS  + +++N NT KVSNGNANP+ DVQKE SK+ L  SGS+ AGRP EDV
Sbjct: 429 TFYNERDP-RSSTRPVKENANTLKVSNGNANPALDVQKEFSKAHLTASGSNAAGRPSEDV 487

Query: 225 ESRTIFVSNV 234
           +SRTIFVSNV
Sbjct: 488 DSRTIFVSNV 497


>Glyma15g42810.1 
          Length = 666

 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/235 (51%), Positives = 149/235 (63%), Gaps = 24/235 (10%)

Query: 1   MASVLKAVAEAAEDVMKSKSSGSVFNRLGSGRNSSVDKSQLEDNFQHQEQNQSLYLQRSG 60
           MA+++KAVAEAAEDV+KSK SGSVF+RLG G ++S D  QLED++QHQEQ+   + QR+ 
Sbjct: 267 MATMIKAVAEAAEDVIKSKPSGSVFDRLGRGIDTSDDNRQLEDSYQHQEQHHLFHSQRTE 326

Query: 61  YNGQRPANTTIMEHETGAHSDSASDNEGFHDVDVMGHRVTEISQFSSSGGNADDSLRLKR 120
           YNG   ANTT+  HETG  SDS SDNEGF+D++VM HR        S   N DDSLR KR
Sbjct: 327 YNGGYAANTTMAGHETGYPSDSNSDNEGFNDINVMDHRY-------SVAKNVDDSLRQKR 379

Query: 121 NREQEKPVAA-RASHKIVNISVNVSTWKPPLYQEPSHFAQLAGHKGSDHETGAHRSGMQL 179
           NREQE+  A+   SHKIVNISVNV+TWKPP +Q  S         G  +    H   + L
Sbjct: 380 NREQEQLAASPNTSHKIVNISVNVNTWKPPQHQRAS---------GEIYPNKYHLDNLVL 430

Query: 180 MEDNTNTSKVSNGNANPSPDVQKESSKSQLCISGSSLAGRPLEDVESRTIFVSNV 234
            E+ T  S++  G          E     + +  S+ AGRP EDV+SRTIFVSNV
Sbjct: 431 SENFTQLSQIGGGGG-------GEKGVVFIILQCSNAAGRPSEDVDSRTIFVSNV 478


>Glyma03g25850.1 
          Length = 208

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 36/43 (83%)

Query: 193 NANPSPDVQKESSKSQLCISGSSLAGRPLEDVESRTIFVSNVN 235
           NANP+ DVQKE SK+ L  SGS+ AGRP EDV+SRTIFVSNV+
Sbjct: 36  NANPALDVQKEFSKAHLTASGSNAAGRPSEDVDSRTIFVSNVH 78