Miyakogusa Predicted Gene

Lj0g3v0119419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0119419.1 tr|Q76KU6|Q76KU6_TOBAC DNA methyltransferase
OS=Nicotiana tabacum GN=NtDRM1 PE=2 SV=1,38.17,4e-19,seg,NULL;
UBA-like,UBA-like,CUFF.7070.1
         (171 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08740.2                                                       125   1e-29
Glyma05g08740.1                                                       125   1e-29
Glyma19g00250.1                                                        51   6e-07

>Glyma05g08740.2 
          Length = 590

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 82/157 (52%)

Query: 14  NIDWTTEDELEIENFQSSSSGLSAPNXXXXXXXXXXXXXXXXXXXKVFDHFIGMGFPREM 73
           N DW TEDELEI+N+ SSSS L+ PN                   KV DHF+ MGF REM
Sbjct: 12  NFDWNTEDELEIQNYNSSSSCLTLPNGDAVTGSGEASSSAVLANSKVLDHFVSMGFSREM 71

Query: 74  VSKVIQXXXXXXXXXXXXXXXTYSALESSXXXXXXXXXXXCSSEYGGXXXXXXXXXXXXX 133
           VSKVIQ               TY ALESS           CSSE  G             
Sbjct: 72  VSKVIQEYGEENEDKLLEELLTYKALESSSRPQQRIEPDPCSSENAGSSWDDFSDTDIFS 131

Query: 134 XXEEVRKPVSENNDTLTSLVKMGFKEEEALIAIERLG 170
             EE+ K +SEN+DTL SLVKMG+K+ EALIAIERLG
Sbjct: 132 DDEEIAKTMSENDDTLRSLVKMGYKQVEALIAIERLG 168


>Glyma05g08740.1 
          Length = 590

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 82/157 (52%)

Query: 14  NIDWTTEDELEIENFQSSSSGLSAPNXXXXXXXXXXXXXXXXXXXKVFDHFIGMGFPREM 73
           N DW TEDELEI+N+ SSSS L+ PN                   KV DHF+ MGF REM
Sbjct: 12  NFDWNTEDELEIQNYNSSSSCLTLPNGDAVTGSGEASSSAVLANSKVLDHFVSMGFSREM 71

Query: 74  VSKVIQXXXXXXXXXXXXXXXTYSALESSXXXXXXXXXXXCSSEYGGXXXXXXXXXXXXX 133
           VSKVIQ               TY ALESS           CSSE  G             
Sbjct: 72  VSKVIQEYGEENEDKLLEELLTYKALESSSRPQQRIEPDPCSSENAGSSWDDFSDTDIFS 131

Query: 134 XXEEVRKPVSENNDTLTSLVKMGFKEEEALIAIERLG 170
             EE+ K +SEN+DTL SLVKMG+K+ EALIAIERLG
Sbjct: 132 DDEEIAKTMSENDDTLRSLVKMGYKQVEALIAIERLG 168


>Glyma19g00250.1 
          Length = 452

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 28/29 (96%)

Query: 142 VSENNDTLTSLVKMGFKEEEALIAIERLG 170
           +SEN+DTL SLVKMG+K+EEAL+AIERLG
Sbjct: 1   MSENDDTLRSLVKMGYKQEEALVAIERLG 29