Miyakogusa Predicted Gene
- Lj0g3v0117959.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0117959.1 Non Chatacterized Hit- tr|A0MFP8|A0MFP8_ARATH
Putative uncharacterized protein (Fragment) OS=Arabido,30.04,1e-18,no
description,NULL; RNI-like,NULL; domain in FBox and BRCT domain
containing pl,FBD; seg,NULL; FBD,,gene.g8946.t1.1
(379 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g35370.1 199 4e-51
Glyma08g46590.2 85 1e-16
Glyma18g35370.1 77 3e-14
Glyma08g46320.1 72 9e-13
Glyma18g35320.1 70 3e-12
Glyma13g35360.1 68 2e-11
Glyma20g28060.1 66 5e-11
Glyma08g46590.1 62 1e-09
Glyma18g35330.1 59 1e-08
Glyma07g07890.1 54 3e-07
Glyma02g14150.1 52 1e-06
>Glyma13g35370.1
Length = 270
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/245 (46%), Positives = 161/245 (65%), Gaps = 8/245 (3%)
Query: 1 MVPALDFNDDNQCFSKSLFVDAVSSVLSQRKTEFITRLCLESYHKRLTPNMVNLLVSIAV 60
+V LDF+D+ CF + F S+L+QRK + I RLCL +Y K + +++ LVS AV
Sbjct: 17 LVLTLDFDDNWPCFFNTTFASVFGSILAQRKAKCIKRLCLYNYSKPFSLDLIGSLVSTAV 76
Query: 61 TNNLEELNL--NYFILEATLPSRLFNCQTLSILKLRGNFNLNLP--SSIXXXXXXXXXXX 116
NLEE++L NY+ E TLP+ LF C+T+S+LKL +NL SSI
Sbjct: 77 AQNLEEMDLICNYY-FEVTLPNTLFTCKTISVLKLSLGLTINLNNISSIHLPSLKVLHVD 135
Query: 117 XXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPSLKKLHVKSNIDRLWIDTP 176
+DDESIMRL SGCPVLEEL ++EV + S F+ICVPSLKKLH+K + R+ + TP
Sbjct: 136 VLYLVDDESIMRLFSGCPVLEELCYEEVKSNNSTSFKICVPSLKKLHLKCHDKRVQVVTP 195
Query: 177 ILVYLKLEETAVVDYLVGDLHDLVEAYIDIFFYHEDENEKENIPKLFSAIQKTRFLCLSS 236
L YL+++ET V D LVG+L +L++A+ DI+F D++EKE + F+AI++T+FL LS+
Sbjct: 196 SLEYLQVQETKVRDSLVGNLPNLLQAHADIYF---DQHEKEYVFNFFNAIRQTKFLGLST 252
Query: 237 VSTEV 241
+ EV
Sbjct: 253 YTIEV 257
>Glyma08g46590.2
Length = 380
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 164/398 (41%), Gaps = 85/398 (21%)
Query: 2 VPALDF-----NDDNQCFSKSLFVDAVSS-VLSQRKTEFITRLCLESYHKRLTPNMVNLL 55
VPAL F +++N + + FV +V + LS+ + R L S P V
Sbjct: 42 VPALHFEESLMDNNNDIETHARFVQSVYAFTLSRDMDQPFRRFHLVSRSFLCNPVNVIAW 101
Query: 56 VSIAVTNNLEELNLNYFIL-EATLPSRLFNCQTLSILKLRGNFNLNLPSSIXXXXXXXXX 114
VS A+ +E L L+ L + LPS LF+C+TL +LKL G N N
Sbjct: 102 VSAALQRRVENLCLSLTPLTKMVLPSALFSCKTLVVLKLIGGLNRN-------------- 147
Query: 115 XXXXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPSLKKLHVKSNIDRLWID 174
P L FK V +P L LH++S I
Sbjct: 148 -------------------PF--PLDFKSVD----------LPLLTTLHLQSFI------ 170
Query: 175 TPILVYLKLEETAVVDYLVGDLHDLVEAYIDIFFYHEDENEKENIPKLFSAIQKTRFLCL 234
LE + + L G +L ++ ++ E E +PKL A + L
Sbjct: 171 --------LERRDMAELLRGS-PNLEYLFVGHMYFSGPEARFERLPKLLRATIAFGHVPL 221
Query: 235 SSVST-EVLTWSCLE-------FPEFHNLVHLQL--SLVTLDSYFLVELLLEKCPKLEVL 284
V+ + L +E PEF NL HL+L S T D ++E++ ++CP L++L
Sbjct: 222 EVVNNVQFLRIDWMEHKEEANLIPEFQNLTHLELGYSECTRDWVDVLEVI-QRCPNLQIL 280
Query: 285 DIE------KVDEESEIEWTEPTTMVPSCLSSHLTMFTYRGYGDSKDELEFVGYILKSGK 338
DI+ ++ +W P + VPS +S HL R YG SK EL F YI+++ +
Sbjct: 281 DIDMGSIDMTTRDDEGADWPFPRS-VPSSISLHLKTCFIRCYGGSKGELRFARYIMRNAR 339
Query: 339 VLKTATIQIANWLKPKKMARSKLFGLPRASKNCGTDFQ 376
L+T I + K KL PR S+ C F+
Sbjct: 340 HLRTMKISTYASRQQKFNMLKKLSLCPRRSRICKLSFK 377
>Glyma18g35370.1
Length = 409
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 164/395 (41%), Gaps = 64/395 (16%)
Query: 2 VPALDFNDD-----NQCFSKSLFVDAVSSVLSQRKTEFITRLCLESYHKRLTPNMVNLLV 56
V LDF+D+ + + F + V SVL I R L + + + +
Sbjct: 59 VSVLDFDDESSPEFHHPGGLTGFAEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWL 118
Query: 57 SIAVTNNLEELNLNYFILE-ATLPSRLFNCQTLSILKLRG-------NFNLNLPSSIXXX 108
E + L+ + LP LF+C T+S++KL G +F+++LP
Sbjct: 119 CHVARRRAERVELSLSLSRYVALPRCLFHCDTVSVMKLNGVFLNALASFSVSLP-----L 173
Query: 109 XXXXXXXXXXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPSLKKLHVKSNI 168
F + +++LL+GCP LE+L E ++ + +C +L
Sbjct: 174 LKVLHVGDRVLFGCHDYVVKLLAGCPALEDLVL-ESTYNDACGGVVCAEGNFQL------ 226
Query: 169 DRLWIDTPILVYLKLEETAVVDYLVGDLHDLVEAYIDIFFYHEDENEKENIPKLFSAIQK 228
DL L A I + E +++ +F A+
Sbjct: 227 --------------------------DLKHLSSAKIGFSW---KERCLKSMLLIFRALSN 257
Query: 229 TRFLCLSSVSTEVLT-WSCLEFPEFHNLVHLQLSLVTLDSYFLVELLLEKCPKLEVLDI- 286
R L LS+ + L S + P F L+ L++S S+ L+ LL++ KLEVL I
Sbjct: 258 VRCLSLSTSTVACLKHASTSDIPVFDKLIQLEISFGNY-SWDLLASLLQRSHKLEVLTIY 316
Query: 287 ---EKVDEESEIEWTEPTTMVPSCLSSHLTMFTYRGYGDSKDELEFVGYILKSGKVLKTA 343
+K + E W P +VP CL HL F R Y + EL+FVGYI+++ +VL+T
Sbjct: 317 KEPQKYAKGQEPRWIHPL-LVPECLL-HLKTFCLREYQGLETELDFVGYIMQNARVLETM 374
Query: 344 TIQIANWL--KPKKMARSKLFGLPRASKNCGTDFQ 376
TI I++ L + K R L L R + C F
Sbjct: 375 TIYISSSLGSEEKLQIRRHLSILQRNFETCQIVFH 409
>Glyma08g46320.1
Length = 379
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 153/375 (40%), Gaps = 74/375 (19%)
Query: 2 VPALDFND----DNQCFSKSLFVDAVSSVLSQRKTE--FITRLCLES--YHKRLTPNMVN 53
+P LD +D N S F A S+L++ + + RL S Y +
Sbjct: 44 IPILDLDDITFIQNGKSYSSFFNFAFGSLLARNVQQPLKLARLRFNSCGYDNNFPYSHFK 103
Query: 54 LLVSIAVTNNLEELNLNYFILEATLPSRLFNCQTLSILKLRGNFNLNLPSSIXXXXXXXX 113
+ V+ + LE L + LP+ + NC+TL +LKL F +N +
Sbjct: 104 IWVNAVIQRGLEHLQIE-MPRPFELPNIILNCKTLVVLKLY-RFRVNALGLVHLPALKTL 161
Query: 114 XXXXXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPSLKKLHVKSNIDRLWI 173
++ + ++L CP+LE+L + F+
Sbjct: 162 HLDNFTMLETWHLAKVLHECPILEDLRANNMFFY-------------------------- 195
Query: 174 DTPILVYLKLEETAVVDYLVGDLHDLVEAYIDIFFYHEDENEKENIP-KLFSAIQKTRFL 232
++ VV++ + + LV+A I + F E IP K+ S ++ RF
Sbjct: 196 ----------NKSDVVEFQI--MPKLVKAEIKVNFRFE-------IPLKVASNVEYLRFF 236
Query: 233 CLSSVSTEVLTWSCLEFPEFHNLVHLQLSLVTLDSYFLVELLLEKCPKLEVLDI-EKVDE 291
TE FP FHNL+HL++S + + LV +++ CPKL+ + ++
Sbjct: 237 I--KPDTEC-------FPVFHNLIHLEVSFWFVVRWNLVFEMIKHCPKLQTFVLFLPLES 287
Query: 292 ESEIEWTEPTTMVPSCLSSHLTMFTYRGYGDSKDELEFVGYILKSGKVLKTATIQIANWL 351
+ WT P +VP C+SS L T Y K EL+F YIL++ + L++ TI
Sbjct: 288 FPPMVWTFPQ-IVPECISSKLRRCTIMNYKGKKYELQFAKYILQNSRALQSMTIH----- 341
Query: 352 KPKKMARSKLFGLPR 366
K R+ F P+
Sbjct: 342 --NKRVRNTYFANPQ 354
>Glyma18g35320.1
Length = 345
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 251 EFHNLVHLQLSLVTLDSYFLVELLLEKCPKLEVLDIEKVDEESEIEWTEPTTMVPSCLSS 310
EF NL HL+ + F V L+++CPKL++L I KVD E P + VP C+S
Sbjct: 221 EFQNLTHLEF--FSYRGGFFVLDLIKRCPKLQILTIYKVDSALFAEGDYPQS-VPICISF 277
Query: 311 HLTMFTYRGYGDSKDELEFVGYILKSGKVLKTATIQI-ANWLKPKKMAR-SKLFGLPRAS 368
HL + T + Y SKDE FV YI+++ K L+ TI ++ K +K+ KL R S
Sbjct: 278 HLKICTLKRYNGSKDEFRFVTYIMENSKYLQIMTISCNSDINKERKLEMFQKLSLCTRCS 337
Query: 369 KNCGTDFQ 376
+C F+
Sbjct: 338 TSCKLLFE 345
>Glyma13g35360.1
Length = 65
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 292 ESEIEWTEPTTMVPSCLSSHLTMFTYRGYGDSKDELEFVGYILKSGK 338
ESE +WT+PT VPSC+SSHLT F +R YG SK ELE YILK+ K
Sbjct: 3 ESERKWTQPTAPVPSCISSHLTAFKFREYGGSKYELELTKYILKNAK 49
>Glyma20g28060.1
Length = 421
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 123/304 (40%), Gaps = 38/304 (12%)
Query: 99 LNLPSSIXXXXXXXXXXXXXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPS 158
LNLPSSI F ES RL SG PVLEEL + ++ I +P
Sbjct: 120 LNLPSSIHFSNLKLLTLQYVVFPGYESTQRLFSGLPVLEELTLDSCCWLNVEIVTIALPM 179
Query: 159 LKKLHVKSNIDRLWIDTPILVYLKLEETAVVDYLVGDLHDLVEAYIDI--------FFYH 210
LKKL +K N+ D + + E Y +G L + Y +
Sbjct: 180 LKKLDIKENL----ADQDNCQFFIIAENLNSFYYIGTLRNDYWIYNSVSLDWGLMGLCST 235
Query: 211 EDENE-------KENIPKLFSAIQKTRFLCLSSVSTEVLTWS---CLEFPEFHNLVHLQ- 259
+D E + +L I + L L+ + EVLT+S C P + + +L
Sbjct: 236 DDIGESSRLREVAQRAGRLLRGISCAKELLLTPYAFEVLTYSEYLCACMPVLYKVTYLGF 295
Query: 260 LSLVTLDSYFLVEL--LLEKCPKLEVLDIEK----VDEESEIEWT-EPTTMVPSCLSSHL 312
LS T ++ L LEK P LE+L + E W +P VPSC S +L
Sbjct: 296 LSPGTAINFGCRALAKFLEKLPCLELLVFQSGVCLSGNHEEGSWILDP---VPSCFSRYL 352
Query: 313 TMFTYRGYGDSKDELEFVGYILKSGKVLKTATI-----QIANWLKPKKMARSKLFGLPRA 367
+ + + EL+ V +LK ++L I + ++ L ++ KL LPRA
Sbjct: 353 KLIRISQFCGTDGELQVVKSLLKHAEILLQMDIICHHEKFSDGLARERDVLEKLQMLPRA 412
Query: 368 SKNC 371
S C
Sbjct: 413 STYC 416
>Glyma08g46590.1
Length = 515
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 140/347 (40%), Gaps = 85/347 (24%)
Query: 2 VPALDF-----NDDNQCFSKSLFVDAVSS-VLSQRKTEFITRLCLESYHKRLTPNMVNLL 55
VPAL F +++N + + FV +V + LS+ + R L S P V
Sbjct: 220 VPALHFEESLMDNNNDIETHARFVQSVYAFTLSRDMDQPFRRFHLVSRSFLCNPVNVIAW 279
Query: 56 VSIAVTNNLEELNLNYFIL-EATLPSRLFNCQTLSILKLRGNFNLNLPSSIXXXXXXXXX 114
VS A+ +E L L+ L + LPS LF+C+TL +LKL G N N
Sbjct: 280 VSAALQRRVENLCLSLTPLTKMVLPSALFSCKTLVVLKLIGGLNRN-------------- 325
Query: 115 XXXXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPSLKKLHVKSNIDRLWID 174
P L FK V +P L LH++S I
Sbjct: 326 -------------------PF--PLDFKSVD----------LPLLTTLHLQSFI------ 348
Query: 175 TPILVYLKLEETAVVDYLVGDLHDLVEAYIDIFFYHEDENEKENIPKLFSAIQKTRFLCL 234
LE + + L G +L ++ ++ E E +PKL A + L
Sbjct: 349 --------LERRDMAELLRGS-PNLEYLFVGHMYFSGPEARFERLPKLLRATIAFGHVPL 399
Query: 235 SSVS-TEVLTWSCLE-------FPEFHNLVHLQL--SLVTLDSYFLVELLLEKCPKLEVL 284
V+ + L +E PEF NL HL+L S T D ++E++ ++CP L++L
Sbjct: 400 EVVNNVQFLRIDWMEHKEEANLIPEFQNLTHLELGYSECTRDWVDVLEVI-QRCPNLQIL 458
Query: 285 DIE------KVDEESEIEWTEPTTMVPSCLSSHLTMFTYRGYGDSKD 325
DI+ ++ +W P + VPS +S HL R YG SK
Sbjct: 459 DIDMGSIDMTTRDDEGADWPFPRS-VPSSISLHLKTCFIRCYGGSKG 504
>Glyma18g35330.1
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 76/359 (21%)
Query: 2 VPALDFNDD-----NQCFSKSLFVDAVSSVLSQRK-TEFITRLCLESYHKRLTPNMVNLL 55
VP+L FND + + + FV V +V+ +R T I R LE P++++
Sbjct: 18 VPSLHFNDQIYWQYGETYYR--FVQLVYTVMLRRDVTRPIERFNLECVSCLCDPSVIDTW 75
Query: 56 VSIAVTNNLEELNLNYFILEATLPSRLFNCQTLSILKLRGNFNLNLPSSIXXXXXXXXXX 115
+ + ++ L+L + LP + TL LKL+G + SS+
Sbjct: 76 LIATIHGKVKHLSL-LLPSDLNLPCCILTSTTLVDLKLKGLTLNSRVSSVDLPSLKTLHL 134
Query: 116 XXXXFIDDESIMRLLSGCPVLEELYFKEVHFHR---SDLFRICVPSLKKLHVKSNIDRLW 172
F++ ++++LS CP+LE+L + +H SD +P L VK++I
Sbjct: 135 RKVHFVEPRLLLQILSACPLLEDLLIRSLHVTNNFSSDEHLERMPKL----VKADISNAS 190
Query: 173 IDTPILVYLKLEETAVVDYLVGDLHDLVEAYIDIFFYHEDENEKENIPKLFSAIQKTRFL 232
ID + + +E + + F+ ++++
Sbjct: 191 IDVQMATFYNVE--------------FLRTQVGSDFFSDNKHT----------------- 219
Query: 233 CLSSVSTEVLTWSCLEFPEFHNLVHLQLSLVTLDSYFLVEL--LLEKCPKLEVLDIEK-- 288
F NL H++L + L L LL +CP L++L +++
Sbjct: 220 -------------------FLNLTHMEL-IFRFRFNVLGRLINLLHECPNLQILVVDEGN 259
Query: 289 --VDEESEIEWTEPTTMVPSCLSSHLTMFTYRGYGDSKDELEFVGYILKSGKVLKTATI 345
V S++ + + VP CLS+ L + YG + EL F Y+L++ +VL + TI
Sbjct: 260 LFVKTSSDVSYPQ---FVPKCLSTQLKRCCVKKYGGQESELRFARYVLQNARVLYSMTI 315
>Glyma07g07890.1
Length = 377
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 23/250 (9%)
Query: 56 VSIAVTNNLEELNLNYFILEATLPS--RLFNCQTLSILKLRGNFNLNLPSSIXXXXXXXX 113
V+ V+ +E +N++ + + + LF C TL LK+ G F ++P +
Sbjct: 103 VNAVVSRKVEHVNISLCMCRSIIFRFPHLFICTTLVTLKIEGLFPFSIPYDVHLPNLQIF 162
Query: 114 XXXXXXFIDDESIMRLLSGCPVLEELYFKEVHFHRSDLFRICVPSLKKLHVKSNIDRLWI 173
+ SI +L+SG P LE K+ ++ S L K+ +K N + +
Sbjct: 163 HLHVNALLSFPSINKLISGSPALELFDLKQ-NWWESQL---------KILLKHNSQVIQV 212
Query: 174 DTPILVY-LKLEETAVVDYLVGDLH-----DLVEAYIDIFFYHEDENEKEN--IPKLFSA 225
Y L +++ D++ ++ ++++A + + +H +N N + +
Sbjct: 213 FHHSSFYGLVIQDDRDYDFISNCMYTHRWPNILKAKVCLTVHHCAKNLYANQIVSNILQG 272
Query: 226 IQKTRFLCLSSVSTEVLTWSCLEFPEFHNLVHLQLSLVTLDSYFLVELLLEKCPKLEVLD 285
+ FL L E + S L+ P F NLV L+L L DS FL L KCPKLEVL+
Sbjct: 273 LCNVEFLSLGDFREE-MDPSILDLPNFENLVDLRLFLKNADSLFLE--LPAKCPKLEVLE 329
Query: 286 IEKVDEESEI 295
+ +D+ I
Sbjct: 330 VNIMDDRYGI 339
>Glyma02g14150.1
Length = 421
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 38/283 (13%)
Query: 78 LPSRLFNCQTLSILKLRGNFNLNLPSSIXXXXXXXXXXXXXXFIDDESIMRLLSGCPVLE 137
+PS LFNC L+ L+L L+ P S I +++ L+S CP+LE
Sbjct: 128 IPSNLFNCGKLTRLEL-SRCELDPPHSFKGFAGLRSLNLHQVLISPDAVESLISRCPLLE 186
Query: 138 EL---YFKEVHFHRSDLFRICVPSLKKLHVKSNIDRLWI-DTPILVYLKLEETAVVDYLV 193
L YF + IC P+LK L+++ + + DTP+LV E ++ Y+
Sbjct: 187 SLSLAYFDNLA------LTICAPNLKYLYLEGEFKDICLEDTPLLV-----EISIAMYMT 235
Query: 194 GDLHDLVEAYIDIFFYHEDENEKENIPKLFSAIQKTRFLCLS--SVSTEVLTWSCLEFPE 251
D+ + E + F + N+ KL I T++L + SV ++
Sbjct: 236 DDIAEHFEQSSNCNFV-KFLGGVPNLEKLVGLIYFTKYLSIGIDSVHPPMM--------- 285
Query: 252 FHNLVHLQLSLVTLDSY---FLVELLLEKCPKLEVLDIEKVD------EESEIEWTEPTT 302
+HNL ++L V + ++ L+ P L+ L I + ++++ E
Sbjct: 286 YHNLESIELYQVNFEDMVEILVILRLITSSPNLKELQISGSSNIPVAVDTPDLDFWEKEC 345
Query: 303 MVPSCLSSHLTMFTYRGYGDSKDELEFVGYILKSGKVLKTATI 345
+ S L+ L G E+EF+ Y+L VL+T +I
Sbjct: 346 LSDSTLNK-LKTVKLSEMGGWPHEIEFIKYLLGRSPVLETLSI 387