Miyakogusa Predicted Gene

Lj0g3v0117459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0117459.1 tr|B9P6P4|B9P6P4_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_792942
PE=4,35.03,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.6920.1
         (438 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g22620.1                                                       595   e-170
Glyma05g38400.1                                                       447   e-125

>Glyma03g22620.1 
          Length = 1702

 Score =  595 bits (1535), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/435 (68%), Positives = 340/435 (78%), Gaps = 8/435 (1%)

Query: 2    ATEYKFPSDFSLIIRQQKWLQTRLGDYRDPRQCILYGPEWKSISSITLLPFINDSDNCYG 61
             TEY+FPS FS II +QKWLQT +G YR PR+CIL GPEWK ISSIT LPFI+DS+NCYG
Sbjct: 1124 GTEYQFPSSFSKIIHEQKWLQTGVGGYRCPRKCILDGPEWKPISSITSLPFIDDSENCYG 1183

Query: 62   MGIHEYKEELKSFGVVTEWKGGLQFVPKYLKFPSDPSTITPESVFSLLECIRLLMQEKKL 121
             GIHEYKEELKS GVVTE K G++FVP+ L FPSDPSTI+PESVFSLLECIRLLM     
Sbjct: 1184 KGIHEYKEELKSIGVVTEVKDGVKFVPECLNFPSDPSTISPESVFSLLECIRLLMHGVVP 1243

Query: 122  VIEDDLTKRLSRNWLKTHAGYHPPDKCLLFNSKWDLYLKPSDGPFIDENFYGPKIASYSK 181
             IED   KRLS+NWLKTH+GY  P KCLLF+SKW+ +LKP+DGPFIDE FYGP+IASY K
Sbjct: 1244 PIEDGFKKRLSQNWLKTHSGYRSPGKCLLFDSKWNKHLKPTDGPFIDEKFYGPEIASYKK 1303

Query: 182  ELNEIGVIVEVEKGCNLVASHLDFLSDYETIVKIYLYLNQ-HWKPE--DKAAKNVWIPDG 238
            ELN IGV ++V +GC LVASHLDFLSDY+TI +IY YL++ HWKPE  DKAA+ +WIP  
Sbjct: 1304 ELNAIGVTIDVGEGCLLVASHLDFLSDYDTIERIYRYLSEHHWKPEPDDKAARKIWIPG- 1362

Query: 239  IKGGKWVNSEECIIHDPDNLFGSKFHVLEGIYDKKILPFFSFAIEVRNKPSLDDYVALWN 298
                KWV SE+C+IHD DNLFGSKF+VL  +YDKKILPFFSFA+EVRNKPS+DDYV LWN
Sbjct: 1363 --SAKWVYSEKCVIHDQDNLFGSKFYVLGDMYDKKILPFFSFAMEVRNKPSIDDYVNLWN 1420

Query: 299  DWESSVEQLPFDKCTMFWMFILKHXXXXXXXXXXXXXXXXXXXXGNNEIFLLDKEDVFIP 358
            DWESSVEQL +DKC  FWMF+LKH                    GNNEI LLDK DVFIP
Sbjct: 1421 DWESSVEQLSYDKCYKFWMFMLKH-FSTETKKLSNCLVKLPATSGNNEIVLLDKNDVFIP 1479

Query: 359  DNLHLKKIFEDETVFAWYPQQNPAPSSRSKLFDIYRKIGVRNISESLQKEESSFLNEVEL 418
            DNLHLKK+F+ E VF WYP QN AP SR +LFD+YRKIG RNISES+  EE S LN VEL
Sbjct: 1480 DNLHLKKLFQQEKVFVWYP-QNLAPLSRCELFDVYRKIGARNISESICMEEPSLLNGVEL 1538

Query: 419  QQVDPNTIFNVKGLV 433
            +QVDP  I NVK L 
Sbjct: 1539 KQVDPGNICNVKVLA 1553



 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 9/187 (4%)

Query: 15   IRQQKWLQTRLGDYRDPRQCILYGPEWKSISSITLLPFINDSDNCYGMGIHEYKEELKSF 74
            I++  WL+T  G  R P   +LY   WK  S I+++PFI+   + YG  I ++KE L+  
Sbjct: 917  IKEGSWLRTSHG-LRSPTGSVLYDSGWKVASKISVIPFIDK--DYYGEDICKFKEVLELL 973

Query: 75   GVVTEWKGGLQFVPKYLKFPSDPSTITPESVFSLLECIRLLMQEKKLVIEDDLTKRLSRN 134
            GV+  +    Q V  +LK  S+ + +T +++   ++CIR      +LV    +T     +
Sbjct: 974  GVIVGFNENYQVVIDHLKSSSELANLTADALLLTMKCIRFSQGSSELVDSLKIT-----S 1028

Query: 135  WLKTHAGYHPPDKCLLFNSKWDLYLKPSDG-PFIDENFYGPKIASYSKELNEIGVIVEVE 193
             LKT+ G+  P +C  ++  W   L+   G P ID  FYG +I +Y  EL +IG +V+ E
Sbjct: 1029 CLKTNMGFKTPSECFFYDPVWGCILEVFSGLPVIDHKFYGKQIFTYKDELKQIGAVVDFE 1088

Query: 194  KGCNLVA 200
            +    +A
Sbjct: 1089 EAIEKIA 1095



 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 9/197 (4%)

Query: 21   LQTRLGDYRDPRQCILYGPEWKSISSI-TLLPFINDSDNCYGMGIHEYKEELKSFGVVTE 79
            L+T +G ++ P +C  Y P W  I  + + LP I+     YG  I  YK+ELK  G V +
Sbjct: 1030 LKTNMG-FKTPSECFFYDPVWGCILEVFSGLPVIDH--KFYGKQIFTYKDELKQIGAVVD 1086

Query: 80   WKGGLQFVPKYLKFPSDPSTITPESVFSLLECIRLLMQEKKLVIEDDLTKRL-SRNWLKT 138
            ++  ++ +    K  +  +      V S L C RLL +  +       +K +  + WL+T
Sbjct: 1087 FEEAIEKIADLFKQKASQTLFNRHHVKSFLSCCRLL-KGTEYQFPSSFSKIIHEQKWLQT 1145

Query: 139  H-AGYHPPDKCLLFNSKWDLYLKPSDGPFID--ENFYGPKIASYSKELNEIGVIVEVEKG 195
               GY  P KC+L   +W      +  PFID  EN YG  I  Y +EL  IGV+ EV+ G
Sbjct: 1146 GVGGYRCPRKCILDGPEWKPISSITSLPFIDDSENCYGKGIHEYKEELKSIGVVTEVKDG 1205

Query: 196  CNLVASHLDFLSDYETI 212
               V   L+F SD  TI
Sbjct: 1206 VKFVPECLNFPSDPSTI 1222



 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 24/303 (7%)

Query: 7    FPSDFSLIIRQQKWLQTRLGDYRDPRQCILYGPEWKSI----SSITLLPFINDSDNCYGM 62
             P  F   I++  WL+  +  +R P +  L G     I    S +  +P I++S   YG 
Sbjct: 793  LPERFLKCIKEGSWLKVTVNGWRPPSKSFLIGSSLGRILQSGSVLVDIPLIDES--FYGS 850

Query: 63   GIHEYKEELKSFGVVTEWKGGLQFVPKYLKFPSDPSTITPESVFSLLECIRLLMQEKKLV 122
             I++YK+ELK+ GV+   +   +F+ + L   +   T++   +  +LE I  L Q   L 
Sbjct: 851  RINQYKDELKTIGVMFSCEEACEFIGRELMSRAVSFTLSRNHILLMLEFIEYLRQ-NYLP 909

Query: 123  IEDDLTKRLSRNWLKTHAGYHPPDKCLLFNSKWDLYLKPSDGPFIDENFYGPKIASYSKE 182
            ++  +      +WL+T  G   P   +L++S W +  K S  PFID+++YG  I  + + 
Sbjct: 910  LDQFVNSIKEGSWLRTSHGLRSPTGSVLYDSGWKVASKISVIPFIDKDYYGEDICKFKEV 969

Query: 183  LNEIGVIVEVEKGCNLVASHLDFLSDYETIVKIYLYLNQHW----KPEDKAAKNVWIPDG 238
            L  +GVIV   +   +V  HL   S+   +    L L        +   +   ++ I   
Sbjct: 970  LELLGVIVGFNENYQVVIDHLKSSSELANLTADALLLTMKCIRFSQGSSELVDSLKITSC 1029

Query: 239  IKGGKWVNS-EECIIHDPDNLFGSKFHVLEGI-------YDKKILPFFSFAIEVRNKPSL 290
            +K      +  EC  +DP  ++G    V  G+       Y K+I   F++  E++   ++
Sbjct: 1030 LKTNMGFKTPSECFFYDP--VWGCILEVFSGLPVIDHKFYGKQI---FTYKDELKQIGAV 1084

Query: 291  DDY 293
             D+
Sbjct: 1085 VDF 1087


>Glyma05g38400.1 
          Length = 1276

 Score =  447 bits (1150), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/421 (53%), Positives = 285/421 (67%), Gaps = 38/421 (9%)

Query: 19   KWLQTRLGDYRDPRQCILYGPEWKSISSITLLPFINDSDNCYGMGIHEYKEELKSFGVVT 78
            KWLQTR+GDYR  ++CIL+GP+W+S S+IT LPFI DSDNCYG  +HEYKEELKS GV+T
Sbjct: 758  KWLQTRVGDYRSSKKCILFGPDWESFSAITRLPFIGDSDNCYGKFVHEYKEELKSTGVIT 817

Query: 79   EWKGGLQFVPKYLKFPSDPSTITPESVFSLLECIRLLMQEKKLVIEDDLTKRLSRNWLKT 138
            E K GL FV  +L+FPSDPS+IT ESVFSLLECIR                        T
Sbjct: 818  EIKHGLNFVTTFLRFPSDPSSITRESVFSLLECIR------------------------T 853

Query: 139  HAGYHPPDKCLLFNSKWDLYLKPSDGPFIDENFYGPKIASYSKELNEIGVIVEVEKGCNL 198
            HAGY PPDKCLLF+SKW  +LKP+DGP IDE FYGP+I   S+ELN IGVI +V+ GC+L
Sbjct: 854  HAGYRPPDKCLLFDSKWSSFLKPTDGPLIDETFYGPEIGLNSEELNAIGVIGDVKIGCSL 913

Query: 199  VASHLDFLSDYETIVKIYLYLNQH-WKPEDKAAKNVWIPDGIKGGKWVNSEECIIHDPDN 257
            +ASHL   S+  TIV+IY  LN++ WKPE+KA K +WIP  +  G+WV+ E+ + HD  +
Sbjct: 914  MASHLYLHSESSTIVRIYRCLNKNDWKPENKATKRIWIPKAVDNGEWVSPEQRVNHDMGD 973

Query: 258  LFGSKFHVLEGIYDKKILPFFSFAIEVRNKPSLDDYVALWNDWESSVEQLPFDKCTMFWM 317
            LF             ++L FFS+A+ VR+ PSLDDY+ +W +WESS EQL  DKC  FW 
Sbjct: 974  LF-------------ELLSFFSYAMGVRSMPSLDDYIEIWKEWESSGEQLSHDKCCNFWA 1020

Query: 318  FILKHXXXXXXXXXXXXXXXXXXXXGNNEIFLLDKEDVFIPDNLHLKKIFEDETVFAWYP 377
            ++L+H                    G++ I LLDK DVF+ DNLHL+ +FE E VF WYP
Sbjct: 1021 YVLQHESKRTVKNIAESLTKLPITSGSDLILLLDKRDVFVADNLHLQNLFEQERVFVWYP 1080

Query: 378  QQNPAPSSRSKLFDIYRKIGVRNISESLQKEESSFLNEVELQQVDPNTIFNVKGLVTLIL 437
            + + A   RS+L D+Y+KIGV  ISES+ KEESS L+ VE++QVDP+ IF  KGLV L+L
Sbjct: 1081 ESSLASLPRSELLDLYKKIGVSIISESVLKEESSLLDGVEVRQVDPSNIFIGKGLVKLVL 1140

Query: 438  G 438
             
Sbjct: 1141 S 1141



 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 21/260 (8%)

Query: 7   FPSDFSLIIRQQKWLQTRLGDYRDPRQCILYGPEWKSI---SSITL----LPFINDSDNC 59
            P  F   I++  WL+  +  YR P    L    W++     S+ L    +PFI+ +   
Sbjct: 531 LPEKFLKCIKEGSWLKVTVNGYRPPLSHFLISSSWETFCKKGSVLLTFHDIPFIDQT--Y 588

Query: 60  YGMGIHEYKEELKSFGVVTEWKGGLQFVPKYLKFPSDPSTITPESVFSLLECIRLLMQEK 119
           YG  I  +KEEL+  GVV  +    + V ++LK  S   ++T E+V  +LECI       
Sbjct: 589 YGGEIDNFKEELQLLGVVVGFSR--KVVTEHLKSRSYLKSLTAEAVVLMLECIHFADVSH 646

Query: 120 KLVIEDDLTKRLSRNWLKTHAGYHPPDKCLLFNSKWDLYLKP-SDGPFIDENFYGPKIAS 178
           KLV   +  KR   N LKT+ G+  P +C L +  W   L   +D P ID  FYG KI +
Sbjct: 647 KLV---NALKR--TNCLKTYIGFEIPSECFLLDPVWGCILNVFNDFPVIDHKFYGDKILT 701

Query: 179 YSKELNEIGVIVEVEKGCNLVASHLDFLSDYETIVKIYL--YLNQHWKPEDKAAKNVWIP 236
           Y  EL + GV+++ E+         +  +   +  K Y+  +L+  ++  +  A   W+ 
Sbjct: 702 YKIELRKTGVVIDFEEAIKAFGHVFEQKASQASFNKHYVESFLSFSFRFLENPAFFKWLQ 761

Query: 237 DGIKGGKWVNSEECIIHDPD 256
             +  G + +S++CI+  PD
Sbjct: 762 TRV--GDYRSSKKCILFGPD 779