Miyakogusa Predicted Gene

Lj0g3v0117349.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0117349.1 Non Chatacterized Hit- tr|I1II88|I1II88_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.77,5e-19,seg,NULL; Usp,UspA; no description,Rossmann-like
alpha/beta/alpha sandwich fold; Adenine nucleotide ,CUFF.6910.1
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g23560.1                                                       266   9e-72
Glyma13g03200.1                                                       261   6e-70
Glyma06g11840.1                                                       232   3e-61
Glyma04g42910.2                                                       228   3e-60
Glyma04g42910.1                                                       219   1e-57
Glyma04g42910.3                                                        94   2e-19
Glyma02g13450.1                                                        93   2e-19
Glyma17g08900.1                                                        79   4e-15

>Glyma14g23560.1 
          Length = 227

 Score =  266 bits (681), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 141/213 (66%), Positives = 154/213 (72%), Gaps = 8/213 (3%)

Query: 16  EAWKSTSNRWSTANDKYNNSGGG----CEASVNQMKGVGMHGNEENAGTXX-XXXXXXXX 70
           EAWKSTS+RWS   DKY++ GGG    CEAS++QM+G  M+GNE+N G            
Sbjct: 18  EAWKSTSSRWS-GKDKYSSVGGGSIEGCEASLSQMEGFSMYGNEDNNGVVMGKKRVMVVV 76

Query: 71  DHTSHSKHAMMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXHLVNYLRSLCRDFKPE 130
           DHTSHSKHAMMWALTHVANKGDLLTLLHVVP             +LVN+L SLC+D KPE
Sbjct: 77  DHTSHSKHAMMWALTHVANKGDLLTLLHVVP--THRGSESSCSTYLVNHLGSLCKDCKPE 134

Query: 131 VEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSYXXXXXXXXXXXXXXXXXAEHCIN 190
           VEVEALVIQGPKLATVMSQVKKLEVS+LVLGQKKPS                  AEHCIN
Sbjct: 135 VEVEALVIQGPKLATVMSQVKKLEVSLLVLGQKKPSPLLSCLCGSNSISSSEEFAEHCIN 194

Query: 191 KAECLTIGVRKRSQGTNGYFISTRWQKNFWLLA 223
            AECLT+GVRKRSQG NGY ISTRWQKNFWLLA
Sbjct: 195 NAECLTVGVRKRSQGNNGYLISTRWQKNFWLLA 227


>Glyma13g03200.1 
          Length = 227

 Score =  261 bits (666), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 138/213 (64%), Positives = 153/213 (71%), Gaps = 8/213 (3%)

Query: 16  EAWKSTSNRWSTANDKYNNSGGGC----EASVNQMKGVGMHGNEENAGTXX-XXXXXXXX 70
           EAWKSTS+RWS   DKY++ GGG     EAS++Q++G  M+GNE+N G            
Sbjct: 18  EAWKSTSSRWS-GKDKYSSVGGGSIEGYEASLSQLEGFAMYGNEDNNGVMMGKKRVMVVV 76

Query: 71  DHTSHSKHAMMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXHLVNYLRSLCRDFKPE 130
           DHTSHS+HAMMWALTHVANKGDLLTLLHVVP             +LVN+L SLC+D KPE
Sbjct: 77  DHTSHSEHAMMWALTHVANKGDLLTLLHVVP--THRGSESSSSTYLVNHLGSLCKDCKPE 134

Query: 131 VEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSYXXXXXXXXXXXXXXXXXAEHCIN 190
           VEVEALVIQGPKLATVM+QVKKLEVSVLVLGQKKPS                  AEHCIN
Sbjct: 135 VEVEALVIQGPKLATVMNQVKKLEVSVLVLGQKKPSSLLSCLCGRNSISSSEEFAEHCIN 194

Query: 191 KAECLTIGVRKRSQGTNGYFISTRWQKNFWLLA 223
            AECLT+GVRKRSQG NGY ISTRWQKNFWLLA
Sbjct: 195 NAECLTVGVRKRSQGNNGYLISTRWQKNFWLLA 227


>Glyma06g11840.1 
          Length = 217

 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/208 (61%), Positives = 137/208 (65%), Gaps = 9/208 (4%)

Query: 16  EAWKSTSNRWSTANDKYNNSGGGCEASVNQMKGVGMHGNEENAGTXXXXXXXXXXDHTSH 75
           EAWK    R++++   +  S GGCE SVN M+G  M       G           D TSH
Sbjct: 19  EAWKE--RRYNSSGGDWGVSFGGCETSVNLMEGFNMM-----QGNVGRKRVMVVVDDTSH 71

Query: 76  SKHAMMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXHLVNYLRSLCRDFKPEVEVEA 135
           SKHAM+WALTHVANKGD LTLLHVVP             +LVNYL SLC+D KP VEVEA
Sbjct: 72  SKHAMLWALTHVANKGDSLTLLHVVP--PHKAPESSCSTYLVNYLGSLCKDCKPGVEVEA 129

Query: 136 LVIQGPKLATVMSQVKKLEVSVLVLGQKKPSYXXXXXXXXXXXXXXXXXAEHCINKAECL 195
           LVIQGPKLATVMSQVKKLEVSVLVLGQKKPS                   E CINKAECL
Sbjct: 130 LVIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLFSCLCGSNGSSSTEEFVEFCINKAECL 189

Query: 196 TIGVRKRSQGTNGYFISTRWQKNFWLLA 223
           TIGVRKRSQGTNGY ISTRWQKNFWLLA
Sbjct: 190 TIGVRKRSQGTNGYLISTRWQKNFWLLA 217


>Glyma04g42910.2 
          Length = 215

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/208 (60%), Positives = 137/208 (65%), Gaps = 10/208 (4%)

Query: 16  EAWKSTSNRWSTANDKYNNSGGGCEASVNQMKGVGMHGNEENAGTXXXXXXXXXXDHTSH 75
           E WK     +++ +  +  S GGCEASV  M+G  M GN                D TSH
Sbjct: 18  EGWKE--RYYNSGSGGWGMSFGGCEASVKLMEGFNMQGN------VGRKRVMVVVDDTSH 69

Query: 76  SKHAMMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXHLVNYLRSLCRDFKPEVEVEA 135
           SKHAM+WALTHVANKGD LTLLHVVP             +LVNYL SLC+D KP VEVEA
Sbjct: 70  SKHAMLWALTHVANKGDSLTLLHVVP--PHRGPESSCSTYLVNYLGSLCKDCKPGVEVEA 127

Query: 136 LVIQGPKLATVMSQVKKLEVSVLVLGQKKPSYXXXXXXXXXXXXXXXXXAEHCINKAECL 195
           L+IQGPKLATVMSQVKKLEVSVLVLGQKKPS                   EHCINKAECL
Sbjct: 128 LLIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCLCGSSGSSSTEEFVEHCINKAECL 187

Query: 196 TIGVRKRSQGTNGYFISTRWQKNFWLLA 223
           TIGVRKRSQGTNGY +STRWQKNFWLLA
Sbjct: 188 TIGVRKRSQGTNGYLVSTRWQKNFWLLA 215


>Glyma04g42910.1 
          Length = 217

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/210 (59%), Positives = 136/210 (64%), Gaps = 12/210 (5%)

Query: 16  EAWKSTSNRWSTANDKYNNSGGGCEASVNQMKGVGMHGNEENAGTXXXXXXXXXXDHTSH 75
           E WK     +++ +  +  S GGCEASV  M+G  M GN                D TSH
Sbjct: 18  EGWKE--RYYNSGSGGWGMSFGGCEASVKLMEGFNMQGN------VGRKRVMVVVDDTSH 69

Query: 76  SKHAMMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXHLVNYLRSLCRDFKPEVE--V 133
           SKHAM+WALTHVANKGD LTLLHVVP             +LVNYL SLC+D KP V   +
Sbjct: 70  SKHAMLWALTHVANKGDSLTLLHVVP--PHRGPESSCSTYLVNYLGSLCKDCKPGVSWLL 127

Query: 134 EALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSYXXXXXXXXXXXXXXXXXAEHCINKAE 193
           EAL+IQGPKLATVMSQVKKLEVSVLVLGQKKPS                   EHCINKAE
Sbjct: 128 EALLIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCLCGSSGSSSTEEFVEHCINKAE 187

Query: 194 CLTIGVRKRSQGTNGYFISTRWQKNFWLLA 223
           CLTIGVRKRSQGTNGY +STRWQKNFWLLA
Sbjct: 188 CLTIGVRKRSQGTNGYLVSTRWQKNFWLLA 217


>Glyma04g42910.3 
          Length = 174

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 65/116 (56%), Gaps = 10/116 (8%)

Query: 16  EAWKSTSNRWSTANDKYNNSGGGCEASVNQMKGVGMHGNEENAGTXXXXXXXXXXDHTSH 75
           E WK     +++ +  +  S GGCEASV  M+G  M GN                D TSH
Sbjct: 18  EGWKE--RYYNSGSGGWGMSFGGCEASVKLMEGFNMQGN------VGRKRVMVVVDDTSH 69

Query: 76  SKHAMMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXHLVNYLRSLCRDFKPEV 131
           SKHAM+WALTHVANKGD LTLLHVVP             +LVNYL SLC+D KP V
Sbjct: 70  SKHAMLWALTHVANKGDSLTLLHVVP--PHRGPESSCSTYLVNYLGSLCKDCKPGV 123


>Glyma02g13450.1 
          Length = 237

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 17/212 (8%)

Query: 20  STSNRWSTANDKYNNSGGGCEASVNQMKGVGMHGNEENAGTXXXXXXXXXXDHTSHSKHA 79
           +T+   +  + K  NS   CE   +         +    G+          D +  +K A
Sbjct: 35  TTTTSATKIDQKTENSCNACEEKFD---------DGAKPGSVIARKIMIVVDSSLEAKSA 85

Query: 80  MMWALTHVANKGDLLTLLHVVPLXXXXXXXXXXXXH-------LVNYLRSLCRDFKPEVE 132
           + WALTH     D + LLHV+                      L +  +++C   +PEV+
Sbjct: 86  VQWALTHTVQDHDTIVLLHVMKPSNKQATDEQSSKEIAPRAYELASSFKNMCHGKRPEVQ 145

Query: 133 VEALVIQGP-KLATVMSQVKKLEVSVLVLGQKKPSYXXXXXXXXXXXXXXXXXAEHCINK 191
           +E  VI+G  K   ++ + KK  V++LVLGQKK S                   E+CI  
Sbjct: 146 IEIAVIEGKEKGPKIVEEAKKQGVALLVLGQKKRSTTWRLLMMWAGHRVTGGVVEYCIQN 205

Query: 192 AECLTIGVRKRSQGTNGYFISTRWQKNFWLLA 223
           A C+ I VR++S+ + GY I+T+  K+FWLLA
Sbjct: 206 AHCMAIAVRRKSKKSGGYMITTKRHKDFWLLA 237


>Glyma17g08900.1 
          Length = 228

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)

Query: 71  DHTSHSKHAMMWALTHVANKGDLLTLLHVV-PLXXXXXXXXX---XXXHLVNYLRSLCRD 126
           D +  +K A+ WAL+H     D + L+HV  P                 L+  ++S+C  
Sbjct: 70  DSSFEAKGALEWALSHTVQTQDTVVLVHVARPTREGTESGSKFNVKTYQLLLDMKSMCEM 129

Query: 127 FKPEVEVEALVIQGP-KLATVMSQVKKLEVSVLVLGQKKPSYXX-XXXXXXXXXXXXXXX 184
            KP V V  ++++G  K   ++ + KK  VS+LV+GQ+K S                   
Sbjct: 130 KKPGVVVNVVMLEGEEKGVAIVQEAKKQRVSLLVVGQRKQSILGCIMRRWVRRRGTRPGI 189

Query: 185 AEHCINKAECLTIGVRKRSQGTNGYFISTRWQKNFWLLA 223
            E+CI  + C+TI VR++++   GY I+T+  KNFWLLA
Sbjct: 190 VEYCIQNSPCMTIAVRRKNKKHGGYLITTKRHKNFWLLA 228