Miyakogusa Predicted Gene

Lj0g3v0116939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116939.1 Non Chatacterized Hit- tr|K4ASQ1|K4ASQ1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.26,0.000000000000006, ,CUFF.6876.1
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g34900.1                                                       209   2e-54
Glyma10g10480.1                                                       155   3e-38

>Glyma02g34900.1 
          Length = 972

 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 113/197 (57%), Positives = 132/197 (67%), Gaps = 28/197 (14%)

Query: 7   KFAMRALSKFRSLDPYLRSQSHVFHLSSKPS-SHPHRAHKLPNSNKLSDTTDASRALFNE 65
           KF MR+LSK RS D  L SQSHV + S+    S  HR  +   SN     TDASRALFNE
Sbjct: 21  KFPMRSLSKIRSWDSILLSQSHVLNFSNASKFSRTHRTTQQQLSNNKPSDTDASRALFNE 80

Query: 66  ITEILGADTVIPDQSPSGFLFPGETRECEGGLNEQPVCAEGVCGNAAEELVVDKGESFAV 125
           ITEILGADTVIPDQSPSGFLFP ET                              E+  +
Sbjct: 81  ITEILGADTVIPDQSPSGFLFPLET---------------------------PHSENVDI 113

Query: 126 MEDAQLGNMGEEELSRMVGEITEIVRSENGSGSMEERLENVGYGLKAEVFDKVLQRCFKM 185
           +EDAQ+GNMGE+++SR+V EITEIVR EN S S+EERLEN+ YGL +EVF  VL+RCFK+
Sbjct: 114 LEDAQMGNMGEKDVSRVVSEITEIVRVENDSSSVEERLENLSYGLNSEVFHMVLKRCFKV 173

Query: 186 PRLALRVFNWLKLKEGF 202
           P+LALRVFNWLKLK+GF
Sbjct: 174 PQLALRVFNWLKLKDGF 190


>Glyma10g10480.1 
          Length = 820

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 93/129 (72%), Gaps = 20/129 (15%)

Query: 57  DASRALFNEITEILGADTVIPDQSPSGFLFPGETRECEGGLNEQPVCAEGVCGNAAEELV 116
           DASRALF EITEILGADTVIPDQSPSGFLFP ET   EGGLN+QP C EGV         
Sbjct: 5   DASRALFIEITEILGADTVIPDQSPSGFLFPLETPHSEGGLNDQPACTEGVY-------- 56

Query: 117 VDKGESFAVMEDAQLGNMGEEELSRMVGEITEIVRSENGSGSMEERLENVGYGLKAEVFD 176
                       AQ+GNMG+ ++SR+VGEI +IVR+EN S ++EE LEN+ YGL +EVFD
Sbjct: 57  ------------AQMGNMGDLDVSRVVGEINDIVRAENDSSTLEEMLENLSYGLNSEVFD 104

Query: 177 KVLQRCFKM 185
            VL+RCFK+
Sbjct: 105 MVLKRCFKL 113