Miyakogusa Predicted Gene

Lj0g3v0116669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116669.1 Non Chatacterized Hit- tr|I1QCQ9|I1QCQ9_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,55.13,0.000000000000007, ,CUFF.6854.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g46710.1                                                        83   6e-17
Glyma07g07700.1                                                        76   9e-15

>Glyma18g46710.1 
          Length = 64

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/43 (90%), Positives = 41/43 (95%)

Query: 1  MQRYHAGNCTSAVNNSTIGGPSTRDIGRTDPSSLPANFPISSR 43
          MQRYHAG+CTSAVNNS IGGPSTRDIGRTD SSLPANFP+SSR
Sbjct: 1  MQRYHAGSCTSAVNNSAIGGPSTRDIGRTDSSSLPANFPVSSR 43


>Glyma07g07700.1 
          Length = 166

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 35/41 (85%), Positives = 37/41 (90%)

Query: 1  MQRYHAGNCTSAVNNSTIGGPSTRDIGRTDPSSLPANFPIS 41
          MQRYHAG+CTSAVNNSTIGGPSTRD GR+D SSLPANF  S
Sbjct: 1  MQRYHAGSCTSAVNNSTIGGPSTRDAGRSDSSSLPANFSWS 41