Miyakogusa Predicted Gene

Lj0g3v0116489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116489.1 Non Chatacterized Hit- tr|G7IVU1|G7IVU1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.16,0,seg,NULL; no description,NULL; BRCT,BRCT domain;
breast cancer carboxy-terminal domain,BRCT domain,CUFF.6860.1
         (1044 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g17870.1                                                       266   8e-71

>Glyma11g17870.1 
          Length = 186

 Score =  266 bits (681), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 122/152 (80%), Positives = 134/152 (88%)

Query: 893  KKLQTIKFLYGCAVGASILKVDWLNDCLASGTILQPEKYMILPNRKDMQWTSIGTAVRHR 952
            +KLQT KFLYGCAVGASILKVDW+ DC+AS TILQPEKYMILPNRKDM+WT IGT + HR
Sbjct: 2    RKLQTTKFLYGCAVGASILKVDWITDCVASRTILQPEKYMILPNRKDMKWTRIGTTIHHR 61

Query: 953  NRKHVFERVGVMLHGKPSFCTKLACIIKHGGGQVFKTLQWLVRSTDEQRTSVGVIVIEDK 1012
            N+K +FERVG++LHGKPSFCTKLACIIKHGGG VFKTLQ L  STDE+RT VG IV+EDK
Sbjct: 62   NQKDIFERVGILLHGKPSFCTKLACIIKHGGGHVFKTLQGLEWSTDEERTLVGAIVVEDK 121

Query: 1013 ATISRHLKHCALERAIPTMPCSWIIESLYLGK 1044
            ATISRHLKHCA ER IP MP SWII+SLY GK
Sbjct: 122  ATISRHLKHCAKERNIPIMPFSWIIKSLYSGK 153