Miyakogusa Predicted Gene

Lj0g3v0116299.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116299.3 Non Chatacterized Hit- tr|I1JJJ1|I1JJJ1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42440 PE,86.7,0,MEIOTIC
RECOMBINATION PROTEIN SPO11,Spo11/DNA topoisomerase VI, subunit A; DNA
topoisomerase IV, alp,CUFF.6826.3
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46920.1                                                       413   e-115
Glyma13g19890.1                                                       176   1e-44
Glyma10g05540.1                                                       175   3e-44
Glyma11g02370.1                                                        88   1e-17

>Glyma02g46920.1 
          Length = 367

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 189/218 (86%), Positives = 208/218 (95%)

Query: 20  IVMGWIRFFEGKRIYDCISSPNTAHPIPVHVEEVQDIVSVAHYILVVEKESVFQRLANDQ 79
           ++MGWIRF EG+RI+DCISSPNTAHP+PVHVEEVQDI+S+A YILVVEKESVFQRLANDQ
Sbjct: 148 LIMGWIRFSEGERIFDCISSPNTAHPVPVHVEEVQDIISLAQYILVVEKESVFQRLANDQ 207

Query: 80  FCNANRCIIITGRGYPDIPTRRFLRLLVDNLHLPAYCLVDCDPYGFDILTTYRFGSMQMA 139
           FCNAN CI+ITGRGYPDIPTRRFLRLLV+NL LPAYCLVDCDPYGFDILTTYRFGSMQMA
Sbjct: 208 FCNANHCIVITGRGYPDIPTRRFLRLLVENLCLPAYCLVDCDPYGFDILTTYRFGSMQMA 267

Query: 140 YDTKHLRVPEIHWLGAFPSDSERYLVPKQCLLPLTAEDKRKIEAMLLRCYLQREVPRWRL 199
           YDTKHLRVPEI WLGAFPSDSERY VP QCLLPLTAEDKRK+EAMLLRCYL+REVP+WRL
Sbjct: 268 YDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTAEDKRKVEAMLLRCYLEREVPQWRL 327

Query: 200 ELKLMLQKGVKFELEALSVRTLAFLTESYIPSKIHGKV 237
           EL+L+LQ+GVKFE+EALSV  L+FL+ESYIPSKI GK+
Sbjct: 328 ELQLILQRGVKFEIEALSVHALSFLSESYIPSKIEGKL 365


>Glyma13g19890.1 
          Length = 417

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 132/217 (60%), Gaps = 1/217 (0%)

Query: 20  IVMGWIRFFEGKRIYDCISSPNTAHPIPVHVEEVQDIVSVAHYILVVEKESVFQRLANDQ 79
           +V+G + F +   + DC         IP +++ V D+ S A +IL+VEK++ + RLA D+
Sbjct: 199 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDR 258

Query: 80  FCNANRCIIITGRGYPDIPTRRFLRLLVDNLHLPAYCLVDCDPYGFDILTTYRFGSMQMA 139
           F N   CII+T +G PD+ TR FLR +   L LP   LVD DPYG  IL+ Y  GS  M+
Sbjct: 259 FYNRFPCIIVTAKGQPDVSTRLFLRKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMS 318

Query: 140 YDTKHLRVPEIHWLGAFPSDSERYLVPKQCLLPLTAEDKRKIEAMLLRCYLQREVPRWRL 199
           YD+ +L  P+I WLG  PSD ++Y +P+QC LP+T +D +  + +L   ++++  P W  
Sbjct: 319 YDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVE 377

Query: 200 ELKLMLQKGVKFELEALSVRTLAFLTESYIPSKIHGK 236
           EL LM++   K E++ALS     +L+E Y+P K+  K
Sbjct: 378 ELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQK 414


>Glyma10g05540.1 
          Length = 419

 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 132/217 (60%), Gaps = 1/217 (0%)

Query: 20  IVMGWIRFFEGKRIYDCISSPNTAHPIPVHVEEVQDIVSVAHYILVVEKESVFQRLANDQ 79
           +V+G + F +   + DC         IP +++ V D+ S A +IL+VEK++ + RLA D+
Sbjct: 201 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDR 260

Query: 80  FCNANRCIIITGRGYPDIPTRRFLRLLVDNLHLPAYCLVDCDPYGFDILTTYRFGSMQMA 139
           F N   CII+T +G PD+ TR FLR +   L LP   LVD DPYG  IL+ Y  GS  M+
Sbjct: 261 FYNRFPCIIVTAKGQPDVSTRLFLRKMKIELKLPVLALVDSDPYGLKILSVYGCGSKNMS 320

Query: 140 YDTKHLRVPEIHWLGAFPSDSERYLVPKQCLLPLTAEDKRKIEAMLLRCYLQREVPRWRL 199
           YD+ +L  P+I WLG  PSD ++Y +P+QC LP+T +D +  + +L   ++++  P W  
Sbjct: 321 YDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVE 379

Query: 200 ELKLMLQKGVKFELEALSVRTLAFLTESYIPSKIHGK 236
           EL LM++   K E++ALS     +L+E Y+P K+  K
Sbjct: 380 ELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQK 416


>Glyma11g02370.1 
          Length = 361

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 29/206 (14%)

Query: 30  GKRIYDCISSPNTAHPIPVHVEEVQDIV--SVAHYILVVEKESVFQRLANDQFCNANRCI 87
           GK   DC    ++   I   +  +  +V  + A Y+++VEK ++FQRL  D+F +    I
Sbjct: 177 GKEAVDCSLCGSSGFAISGDLNLLDSLVLNADARYVIIVEKHAIFQRLTEDRFFHQIPSI 236

Query: 88  IITGRGYPDIPTRRFLRLLVDNLHLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRV 147
           +IT +GYPDI TR                    +P G  IL T++FGS+ M  +  +   
Sbjct: 237 LITAKGYPDIATR--------------------NPAGLAILCTFKFGSIGMGLEA-YRYA 275

Query: 148 PEIHWLGAFPSDSERYLVPKQCLLPLTAEDKRKIEAMLLRCYLQREVPRWRLELKLMLQK 207
             + WLG    D    L+P Q  +PL  +D +  ++++    LQ     ++ E+ LM+Q 
Sbjct: 276 CNVKWLGLRGHDLP--LLPNQSFVPLKPKDLQIAQSLMSSGILQ---DNYKEEVALMVQS 330

Query: 208 GVKFELEALSVRTLAFLTESYIPSKI 233
           G + E+EAL      +L + YI  KI
Sbjct: 331 GRRAEIEALYFNGYDYLGK-YIAKKI 355