Miyakogusa Predicted Gene

Lj0g3v0116239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116239.1 Non Chatacterized Hit- tr|D7TDB7|D7TDB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50,7e-17,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type;
coiled-coil,NULL; MYB_LIKE,Myb-like domain; PHD zin,CUFF.6822.1
         (373 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g37810.1                                                       130   2e-30
Glyma13g26790.1                                                       107   3e-23
Glyma04g00630.1                                                        72   8e-13
Glyma04g00620.1                                                        60   6e-09

>Glyma15g37810.1 
          Length = 526

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 14/141 (9%)

Query: 12  SPNPSATVPSPSSIPLLSTVNQDQHTATVFDSDGDDNVPMTPDHR-------PEPEPVDL 64
           +P  + T PS S+IP+LS    + +  T FD+D DD+      HR       PE EPVD+
Sbjct: 13  APATTLTSPSLSAIPILSD-EHNNNAPTAFDTDCDDD-NNALHHRGSEPEPEPELEPVDI 70

Query: 65  FDEDICIGCD----QSEGTLLVCSEKGCPIAIHASCIGSEPKFDASGSFYCPYCWYKRAV 120
           FD+ ICI CD    ++EG +L+C  +GCP+A+HA+C+G EP+FD SG+F CPYCWYKRAV
Sbjct: 71  FDKTICIHCDNKGEEAEG-VLICGGRGCPVAVHATCLGFEPEFDDSGNFCCPYCWYKRAV 129

Query: 121 NDCRQLRQKAMMAKEALTSFL 141
           + CR+LR+KAM AK  L+ F 
Sbjct: 130 DTCRRLREKAMKAKGELSRFF 150


>Glyma13g26790.1 
          Length = 389

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 82/154 (53%), Gaps = 13/154 (8%)

Query: 230 ETAREEEGKESSTGSFMSETNDSDYDA-SLXXXXXXXXXXXXXXXSL------------M 276
           E  ++EEGK +   S +SET DSD  A S+               SL             
Sbjct: 224 EEKKDEEGKVAVMSSSVSETYDSDSVAVSMKKRKDKKKKVTSARKSLSLQQEHKNKHYKT 283

Query: 277 ESNVGDENGEVSSTGTSRKPKQQVNRILLTGKRRRRLYWTDDEEKALKEGVLKFSLENQN 336
              V +E    S   TS   + Q  +      +R+RL WT +EEK LKEGV KFS ENQN
Sbjct: 284 RGKVANEEEVTSFKTTSLGQQPQRMKQSSLAAKRKRLLWTAEEEKVLKEGVSKFSTENQN 343

Query: 337 IPWRKILEFGCGTFDKTRAPSDLKDKWKKMISKQ 370
           IPWRKILEFGC  FD+TR P DLKDKWK +ISK+
Sbjct: 344 IPWRKILEFGCRVFDETRTPVDLKDKWKNIISKK 377



 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 8/119 (6%)

Query: 62  VDLFDEDICIGCDQS-----EGTLLVCSEKGCPIAIHASCIGSEPKFDASGSFYCPYCWY 116
           +D +D  ICI C+       E  LL+CS +GCP+A+HA+C+ + PKFD SG+F CPYCWY
Sbjct: 1   MDAYD-TICIHCNNKGEEAKEDGLLICSGRGCPVAVHATCLATGPKFDGSGNFCCPYCWY 59

Query: 117 KRAVNDCRQLRQKAMMAKEALTSFLDSKPQLVRQDGCEEHIAEPGIPPGQDLNREEPET 175
           KRAV+ CR+LR+KA+ AK      ++      +    ++   E  +    D  REE ET
Sbjct: 60  KRAVDTCRRLREKALEAKGDFEELMEETGTQAQSKDNKDEEGEARVNQVHD--REETET 116


>Glyma04g00630.1 
          Length = 640

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 55/85 (64%), Gaps = 2/85 (2%)

Query: 65  FDEDICIGCDQSEGTLLVCSEKGCPIAIHASCIGSEPKFDASGSFYCPYCWYKRAVNDCR 124
            ++++C+ C +  G LL C    CP+ +H +C+G+  + DA G+F+CP+C Y  A+++  
Sbjct: 391 IEQNLCMKCHEG-GQLLACKTTTCPLMVHKNCLGASAQLDAKGNFFCPFCAYSHAISEYL 449

Query: 125 QLRQKAMMAKEALTSFLDSKPQLVR 149
           + ++ A +A++ L  F+ SK +L++
Sbjct: 450 ESKENASLARKELAIFI-SKGKLIQ 473


>Glyma04g00620.1 
          Length = 68

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 8/61 (13%)

Query: 309 RRRRLYWTDDEEKALKEGVLKFSLENQNIPWRKILEFGCGTFDKT---RAPSDLKDKWKK 365
           RR+++ WT +EE+ +KEGV KF  E     W+KIL+FG   FDK    R P DLKDKW+ 
Sbjct: 5   RRKKIPWTAEEEEKIKEGVQKFGKE-----WKKILQFGSHVFDKVGKRRTPHDLKDKWRN 59

Query: 366 M 366
           M
Sbjct: 60  M 60