Miyakogusa Predicted Gene

Lj0g3v0115719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0115719.1 Non Chatacterized Hit- tr|D7LC59|D7LC59_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,31.22,8e-19,LEA_2,Late embryogenesis abundant protein, LEA-14;
seg,NULL,gene.g8746.t1.1
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05750.1                                                       236   2e-62
Glyma11g31430.1                                                       233   1e-61

>Glyma18g05750.1 
          Length = 200

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/183 (65%), Positives = 131/183 (71%), Gaps = 13/183 (7%)

Query: 28  FACCAWGCXXXXXXXXXXXXAGISYLGFLKAGMPKV-------------DSSQKMDADIS 74
           FACCAW C             GI+YL FLK+GMPKV             D SQKM+A I 
Sbjct: 17  FACCAWSCLIMFLLIIAILFLGITYLAFLKSGMPKVNVRAFNITKLQVDDGSQKMNAVIG 76

Query: 75  LGLRISNKNEKLKLLYGPLSVDVTSEDVPLGMAKLKGFSQMPKNDTDLDMTMALHNADVD 134
           LGL  SNKN+KLKLLYGPL VDVTSEDV LG  KL GF Q P NDT LDMTM L NADVD
Sbjct: 77  LGLIFSNKNDKLKLLYGPLDVDVTSEDVLLGKKKLGGFYQNPLNDTQLDMTMTLENADVD 136

Query: 135 KYAADDLKSDINANEMVFDVYVSGHIGLKVGSLQMTDIPFLASCHQIKQMDVDFGRRPEC 194
           KYAA+DL SDI A EMVFD+YV GHIG +VG LQM ++PFLASCHQIK+ DVDFGR+PEC
Sbjct: 137 KYAAEDLISDIKAYEMVFDLYVGGHIGFQVGKLQMNNVPFLASCHQIKREDVDFGRKPEC 196

Query: 195 DVK 197
           DVK
Sbjct: 197 DVK 199


>Glyma11g31430.1 
          Length = 238

 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 128/239 (53%), Positives = 147/239 (61%), Gaps = 45/239 (18%)

Query: 1   MEEQQTKPALVKNPSTGSRKMGRRVAF-------------------------------FA 29
           MEE ++K  L KNPS  SR   RRVA                                FA
Sbjct: 1   MEEGKSKSTLAKNPSR-SRNPSRRVALDVPSPRHMGSTLSGIHSSIDHLDKGRYHPCCFA 59

Query: 30  CCAWGCXXXXXXXXXXXXAGISYLGFLKAGMPKV-------------DSSQKMDADISLG 76
           CCAW C             GI+YL FLK+GMPK+             D SQKM++ I LG
Sbjct: 60  CCAWSCLIVFILIIAILFLGITYLAFLKSGMPKINVRAFNITKFQVDDGSQKMNSVIGLG 119

Query: 77  LRISNKNEKLKLLYGPLSVDVTSEDVPLGMAKLKGFSQMPKNDTDLDMTMALHNADVDKY 136
           L  SNKN+KLKLLYGPL VDVTSEDV LG  K  GFSQ P N T+LDMTM L NADVDKY
Sbjct: 120 LIFSNKNDKLKLLYGPLDVDVTSEDVLLGKKKQGGFSQKPLNVTNLDMTMTLENADVDKY 179

Query: 137 AADDLKSDINANEMVFDVYVSGHIGLKVGSLQMTDIPFLASCHQIKQMDVDFGRRPECD 195
           AA++LKSDI A EMVFD+YV GHIG +VG LQM ++PFLASC+QIK+ DVDFGR+PEC+
Sbjct: 180 AAEELKSDIKAYEMVFDLYVGGHIGFQVGKLQMNNVPFLASCNQIKREDVDFGRKPECE 238