Miyakogusa Predicted Gene

Lj0g3v0115469.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0115469.1 tr|A9SB45|A9SB45_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_163909,30.9,3e-18,Xpo1,Exportin-1/Importin-beta-like;
seg,NULL; UNCHARACTERIZED,NULL; TRANSPORTIN 3 AND IMPORTIN
13,NU,CUFF.6751.1
         (306 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g04880.1                                                       427   e-120
Glyma19g28350.1                                                       278   6e-75
Glyma17g10280.1                                                        54   2e-07
Glyma05g01600.1                                                        51   2e-06

>Glyma16g04880.1 
          Length = 980

 Score =  427 bits (1098), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/296 (72%), Positives = 231/296 (78%), Gaps = 22/296 (7%)

Query: 9   FKLQIQNEGYQLQXXXXXXXXXXXXXXVQRFSSGPPQLLTQICLALSALILQVVAHGNPI 68
            K +IQNEGY LQ              V+RFS+GPPQLLTQICLALSAL+LQV AHGNPI
Sbjct: 69  LKRKIQNEGYLLQLGAKDALLNALLLAVKRFSTGPPQLLTQICLALSALVLQVAAHGNPI 128

Query: 69  EQLFYSLQNLQSQDGGNMAVLEMLTVLPEEVVDSQRIDSKMSSLHKSHYTQELLSHTSMV 128
           EQLFYSL+NLQSQD GN AVLEMLTVLPEE                      LLSHT MV
Sbjct: 129 EQLFYSLRNLQSQDDGNFAVLEMLTVLPEE----------------------LLSHTPMV 166

Query: 129 LEFLRQQSEINSDGSVQHHERNKKILRCFLSWIRAGCFSEISSGTLPAHPLLNFVFNSLQ 188
           LEFL QQSE N DGSVQ HERN+KILRC LSW++AGCFSEIS GTLPAHPLLNF+FNSLQ
Sbjct: 167 LEFLLQQSETNFDGSVQQHERNRKILRCLLSWVKAGCFSEISPGTLPAHPLLNFLFNSLQ 226

Query: 189 VPLTFDLAIEVLVELGTKHEGLPQILLCRVHYLKEVLLFPALTRGDMKVIGGVACLLSEI 248
           VPL+FDLAIEVLVEL TKHEG+PQILLCRVHYLKEVLLFPA +RGD+KV+GG+ACLLSEI
Sbjct: 227 VPLSFDLAIEVLVELVTKHEGVPQILLCRVHYLKEVLLFPARSRGDIKVMGGLACLLSEI 286

Query: 249 GQAAPSLIVEXXXXXXXXXXXXXSCVAFPCEDWEIADSTLQFWSTLASYILGIDED 304
           GQAAPSLIVE             SCVAFP EDWEIADSTLQFWSTLASYILGIDED
Sbjct: 287 GQAAPSLIVEASAEALALTDALLSCVAFPSEDWEIADSTLQFWSTLASYILGIDED 342


>Glyma19g28350.1 
          Length = 259

 Score =  278 bits (711), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 157/195 (80%), Gaps = 4/195 (2%)

Query: 9   FKLQIQNEGYQLQXXXXXXXXXXXXXXVQRFSSGPPQLLTQICLALSALILQVVAHGNPI 68
            K +IQNEGY LQ              V+RFS+GPPQLLTQICLALSAL+LQV AHGNPI
Sbjct: 69  LKRKIQNEGYLLQLGVKDALLNALLLAVKRFSTGPPQLLTQICLALSALVLQVAAHGNPI 128

Query: 69  EQLFYSLQNLQSQDGGNMAVLEMLTVLPEEVVDSQRIDSKMSSLHKSHYTQELLSHTSMV 128
           +QLFYSL+NLQSQD  N+AVLEMLTVLPEEVVD+Q IDSK+S          LLSHT MV
Sbjct: 129 KQLFYSLRNLQSQDDDNIAVLEMLTVLPEEVVDNQHIDSKISL----GTFALLLSHTPMV 184

Query: 129 LEFLRQQSEINSDGSVQHHERNKKILRCFLSWIRAGCFSEISSGTLPAHPLLNFVFNSLQ 188
           LEFL QQSE N DGSVQ HERN+KILRC LSW++AGCFSEIS GTLPAHPLLNF+FNSLQ
Sbjct: 185 LEFLLQQSETNFDGSVQQHERNRKILRCLLSWVKAGCFSEISPGTLPAHPLLNFLFNSLQ 244

Query: 189 VPLTFDLAIEVLVEL 203
           VPL+FDLAIEVLVEL
Sbjct: 245 VPLSFDLAIEVLVEL 259


>Glyma17g10280.1 
          Length = 960

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 30/271 (11%)

Query: 36  VQRFSSGPPQLLTQICLALSALILQVVAHGNPIEQLFYSLQN-LQSQDGGNMAVLEMLTV 94
           +++F  GPP++ TQI +A++AL + V A       +   L++ + S        LE+LTV
Sbjct: 91  LKKFHKGPPKVRTQISIAVAALAVHVPAEDWGDGGIVKWLRDEMDSHPEYIPGFLELLTV 150

Query: 95  LPEEVVDSQRIDSKMSSLHKSHYTQELLSHTSMVLEFLRQQSEINSDGSVQHHERNKKIL 154
           LPEEV++  +I ++     +  + +EL S   + L  L     I+        E  +++L
Sbjct: 151 LPEEVLN-YKIAARPE--RRRQFEKELTSQMEIALNILTACLSIS--------ELKEQVL 199

Query: 155 RCFLSWIRAGCFSEISSGTLPAHPLLNFVFNSLQVPLTFDLAIEVLVEL----------- 203
             F SW+R      I    L +HPL+    +SL   L  + ++ V+ EL           
Sbjct: 200 EAFASWLRLK--HGIPGSVLSSHPLVLTALSSLNSELLSEASVNVISELIHYTTAGNIDG 257

Query: 204 GTKHEGLPQILLCRVHYLKEVLLFPALTRGDMKVIGGVACLLSEIGQAAPSLIVEXXXXX 263
            + +  L Q+++ +V  LK  L     +  D + +  +A L +++G +   LI       
Sbjct: 258 VSANMPLIQVIVPQVMNLKVQL---GDSTKDEEDVKAIARLFADMGDSYVELIATGSDES 314

Query: 264 XXXXXXXXSCVAFPCEDWEIADSTLQFWSTL 294
                      + P  +++IA  T  FW +L
Sbjct: 315 MLIVHALLEVASHP--EYDIASMTFNFWHSL 343


>Glyma05g01600.1 
          Length = 959

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 29/270 (10%)

Query: 36  VQRFSSGPPQLLTQICLALSALILQVVAHGNPIEQLFYSLQN-LQSQDGGNMAVLEMLTV 94
           +++F  GPP++ TQI +A++AL + V A       +   L++ + S        LE+LTV
Sbjct: 91  LKKFHKGPPKVRTQISIAVAALAVHVPAEDWGDGGIVKWLRDEMDSHPEYIPGFLELLTV 150

Query: 95  LPEEVVDSQRIDSKMSSLHKSHYTQELLSHTSMVLEFLRQQSEINSDGSVQHHERNKKIL 154
           LPEEV++  +I ++     +  + +EL S   + L  L     I+        E  +++L
Sbjct: 151 LPEEVLN-YKIAARPE--RRRQFEKELTSQMEVSLNILTACLSIS--------ELKEQVL 199

Query: 155 RCFLSWIRAGCFSEISSGTLPAHPLLNFVFNSLQVPLTFDLAIEVLVEL----------G 204
             F SW+R      I    L +HPL+    +SL   L  + ++ V+ EL           
Sbjct: 200 EAFASWLRLK--HGIPGSVLSSHPLVLTALSSLNSELLSEASVNVISELIHYTTAGDIDV 257

Query: 205 TKHEGLPQILLCRVHYLKEVLLFPALTRGDMKVIGGVACLLSEIGQAAPSLIVEXXXXXX 264
           + +  L Q+++  V  LK  L   + +  D + +  +A L +++G +   LI        
Sbjct: 258 SANMPLIQVIVPHVMNLKAQL---SDSTKDEEDVKAIARLFADMGDSYVELIATGSDESM 314

Query: 265 XXXXXXXSCVAFPCEDWEIADSTLQFWSTL 294
                     +    +++IA  T  FW +L
Sbjct: 315 LIVHALLEVASH--AEYDIASMTFNFWHSL 342