Miyakogusa Predicted Gene

Lj0g3v0114929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0114929.1 Non Chatacterized Hit- tr|K4CS14|K4CS14_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,50,0.0000004,
,CUFF.6711.1
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g19050.1                                                       118   1e-27
Glyma18g43640.1                                                       112   7e-26

>Glyma07g19050.1 
          Length = 91

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/91 (69%), Positives = 67/91 (73%), Gaps = 8/91 (8%)

Query: 1  MWNWKGWRCFKRLSIYSIK------TSNFRFKPIGHRNGLVSLYKDMESCGEYADIQVMW 54
          M NW+GWR  KRLSIY IK      TSNFRFK  GHRNGL+SLYKDMESCGEYADIQVMW
Sbjct: 1  MGNWEGWRYIKRLSIYPIKSILRKVTSNFRFKSEGHRNGLLSLYKDMESCGEYADIQVMW 60

Query: 55 KMIESSSTH--GFKKKKANSFSLWVICFRPA 83
          KMIESSS       KK+ N  S WV+CFRP 
Sbjct: 61 KMIESSSPQYACCHKKRINRSSYWVVCFRPT 91


>Glyma18g43640.1 
          Length = 89

 Score =  112 bits (281), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/86 (69%), Positives = 65/86 (75%), Gaps = 7/86 (8%)

Query: 1  MWNWKGWRCFKRLSIYSIK------TSNFRFKPIGHRNGLVSLYKDMESCGEYADIQVMW 54
          M NWKGWR F RLSIY IK      TSNFRFK  GHRNGL+SLYKDMESCGEYADI+VMW
Sbjct: 1  MGNWKGWRYFNRLSIYPIKSILRKVTSNFRFKTEGHRNGLLSLYKDMESCGEYADIKVMW 60

Query: 55 KMIESSS-THGFKKKKANSFSLWVIC 79
          KMIESSS  +   KK+ N  S WV+C
Sbjct: 61 KMIESSSPQYACHKKRINRSSYWVVC 86