Miyakogusa Predicted Gene

Lj0g3v0114339.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0114339.1 tr|A0EFD6|A0EFD6_PARTE Chromosome undetermined
scaffold_93, whole genome shotgun sequence
OS=Paramec,34.92,0.000000000000001,no
description,Tetratricopeptide-like helical; TPR-like,NULL;
seg,NULL,CUFF.6661.1
         (807 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g26550.1                                                       296   5e-80

>Glyma05g26550.1 
          Length = 628

 Score =  296 bits (759), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 160/267 (59%), Positives = 199/267 (74%), Gaps = 10/267 (3%)

Query: 533 IKLGDRFQKKDGRXXXXXXXXXXXXAQSYWSSELLSVGIAVLRNLEALYKFSVNSDLSDF 592
           +KLGDRF KK+GR            A+SYWSS+L+SVG+ VL  L+ALYKFS +  LS+F
Sbjct: 1   MKLGDRFLKKNGRLVSVDVQDLVSAAESYWSSQLVSVGMKVLHILDALYKFSASKALSEF 60

Query: 593 HQFQSLLHIYEVSEFLLGSKCFSHTHGNLKTLDKFRRLPIDRSLRYIVPLDWKKSLTKDM 652
            QF+SL  IY+V +FLL SKCF+  HGNLKTL+KF R PIDRSL Y+VPLDW KSL KDM
Sbjct: 61  CQFRSLFLIYDVFKFLLKSKCFNLNHGNLKTLEKFSRTPIDRSLCYLVPLDWSKSLIKDM 120

Query: 653 VFLRTTEACKDLVKETIYENIRLKERLTYGQIGRVAVMIMGTASLPNELYVEIMTRFKDN 712
           V+LRTTE C+DLVK+ IYENI  K+ LTYGQIG V VMI+GTA+L +EL+V+I+ RFK+N
Sbjct: 121 VYLRTTETCQDLVKDVIYENINRKDMLTYGQIGNVVVMILGTANLKSELFVKILARFKEN 180

Query: 713 TPWNKFIQ--QWSPAQEISQRNDSSAELNRALSLYEALQYTYNVNWIKETDYLSPSCFMY 770
             W +FIQ    + AQ+ S   D + E     + Y+ALQYTY+VNW +E DY+SPSCFMY
Sbjct: 181 PLWQEFIQSLHLNSAQKNSHV-DEAVE-----NFYKALQYTYSVNWTREIDYISPSCFMY 234

Query: 771 LVERLLLLASCR--KGLMFATKSSFIE 795
           L++RLLLL S    KG +FATKSSF+E
Sbjct: 235 LLDRLLLLTSHGKWKGFIFATKSSFVE 261