Miyakogusa Predicted Gene

Lj0g3v0114199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0114199.1 Non Chatacterized Hit- tr|I1NCM0|I1NCM0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5088
PE=,64.18,4e-19,RING/U-box,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; SEVEN IN ABSENTIA HOMOLOG,Seven-in-,CUFF.6648.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g26890.2                                                       186   5e-48
Glyma13g26890.1                                                       186   5e-48
Glyma15g37920.2                                                       186   7e-48
Glyma15g37920.1                                                       186   7e-48
Glyma13g26890.3                                                       186   1e-47
Glyma19g44520.2                                                       102   1e-22
Glyma19g44520.1                                                       102   1e-22
Glyma19g44520.3                                                       101   2e-22
Glyma19g44520.4                                                       101   2e-22
Glyma04g41410.1                                                       101   3e-22
Glyma04g41410.3                                                       100   5e-22
Glyma04g41410.2                                                       100   7e-22
Glyma03g41860.2                                                       100   7e-22
Glyma03g41860.1                                                       100   9e-22
Glyma06g13440.1                                                        99   1e-21
Glyma19g33170.2                                                        86   2e-17
Glyma19g33170.1                                                        86   2e-17
Glyma03g30250.3                                                        85   2e-17
Glyma03g30250.2                                                        85   2e-17
Glyma03g30250.1                                                        85   2e-17

>Glyma13g26890.2 
          Length = 304

 Score =  186 bits (473), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 88/104 (84%), Positives = 91/104 (87%)

Query: 1   MASSNPLFDDIWSKADVDPPQNEELTGVIELVNDTAQATLKPNGTVSSSVRELLECPVCL 60
           MASSN  FDDI SK DVDPPQNEE T V EL+ND AQ  LKPNGTVSSSVRELLECPVCL
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQNEESTDVGELLNDPAQTALKPNGTVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNI  L ++
Sbjct: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALE 104


>Glyma13g26890.1 
          Length = 304

 Score =  186 bits (473), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 88/104 (84%), Positives = 91/104 (87%)

Query: 1   MASSNPLFDDIWSKADVDPPQNEELTGVIELVNDTAQATLKPNGTVSSSVRELLECPVCL 60
           MASSN  FDDI SK DVDPPQNEE T V EL+ND AQ  LKPNGTVSSSVRELLECPVCL
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQNEESTDVGELLNDPAQTALKPNGTVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNI  L ++
Sbjct: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALE 104


>Glyma15g37920.2 
          Length = 304

 Score =  186 bits (472), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 88/104 (84%), Positives = 91/104 (87%)

Query: 1   MASSNPLFDDIWSKADVDPPQNEELTGVIELVNDTAQATLKPNGTVSSSVRELLECPVCL 60
           MASSN  FDDI SK DVDPPQN+E T V ELVND AQ  LKPNGTVSSSVRELLECPVCL
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQNDESTDVGELVNDPAQTALKPNGTVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNI  L ++
Sbjct: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALE 104


>Glyma15g37920.1 
          Length = 304

 Score =  186 bits (472), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 88/104 (84%), Positives = 91/104 (87%)

Query: 1   MASSNPLFDDIWSKADVDPPQNEELTGVIELVNDTAQATLKPNGTVSSSVRELLECPVCL 60
           MASSN  FDDI SK DVDPPQN+E T V ELVND AQ  LKPNGTVSSSVRELLECPVCL
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQNDESTDVGELVNDPAQTALKPNGTVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNI  L ++
Sbjct: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALE 104


>Glyma13g26890.3 
          Length = 213

 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/104 (84%), Positives = 91/104 (87%)

Query: 1   MASSNPLFDDIWSKADVDPPQNEELTGVIELVNDTAQATLKPNGTVSSSVRELLECPVCL 60
           MASSN  FDDI SK DVDPPQNEE T V EL+ND AQ  LKPNGTVSSSVRELLECPVCL
Sbjct: 1   MASSNLFFDDIRSKVDVDPPQNEESTDVGELLNDPAQTALKPNGTVSSSVRELLECPVCL 60

Query: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNI  L ++
Sbjct: 61  NAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALE 104


>Glyma19g44520.2 
          Length = 307

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           + L  NG  ++SV +LLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 34  SKLHSNGPTTTSVHDLLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 93

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 94  IRCLALE 100


>Glyma19g44520.1 
          Length = 314

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           + L  NG  ++SV +LLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 34  SKLHSNGPTTTSVHDLLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 93

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 94  IRCLALE 100


>Glyma19g44520.3 
          Length = 217

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           + L  NG  ++SV +LLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 34  SKLHSNGPTTTSVHDLLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 93

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 94  IRCLALE 100


>Glyma19g44520.4 
          Length = 204

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           + L  NG  ++SV +LLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 34  SKLHSNGPTTTSVHDLLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 93

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 94  IRCLALE 100


>Glyma04g41410.1 
          Length = 323

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)

Query: 39  TLKPNGTV-SSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           ++ PNG   ++SV ELLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 44  SVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 103

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 104 IRCLALE 110


>Glyma04g41410.3 
          Length = 233

 Score =  100 bits (249), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)

Query: 39  TLKPNGTV-SSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           ++ PNG   ++SV ELLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 44  SVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 103

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 104 IRCLALE 110


>Glyma04g41410.2 
          Length = 248

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)

Query: 39  TLKPNGTV-SSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           ++ PNG   ++SV ELLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 44  SVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 103

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 104 IRCLALE 110


>Glyma03g41860.2 
          Length = 304

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           + L  +G  ++SV +LLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 31  SKLHNSGPTTTSVHDLLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 90

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 91  IRCLALE 97


>Glyma03g41860.1 
          Length = 311

 Score = 99.8 bits (247), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query: 38  ATLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           + L  +G  ++SV +LLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 31  SKLHNSGPTTTSVHDLLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 90

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 91  IRCLALE 97


>Glyma06g13440.1 
          Length = 327

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)

Query: 39  TLKPNGTV-SSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGN 97
           ++ PN    ++SV ELLECPVC N+MYPPIHQC NGHT+CS CK RVHNRCPTCR ELG+
Sbjct: 45  SVGPNAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGD 104

Query: 98  ISALVVD 104
           I  L ++
Sbjct: 105 IRCLALE 111


>Glyma19g33170.2 
          Length = 309

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 45/60 (75%)

Query: 45  TVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           + ++ V ELL CPVC N MYPPIHQC NGHT+CS CK  VHN CP+C H+LGNI  L ++
Sbjct: 50  SSNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALE 109


>Glyma19g33170.1 
          Length = 309

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 45/60 (75%)

Query: 45  TVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           + ++ V ELL CPVC N MYPPIHQC NGHT+CS CK  VHN CP+C H+LGNI  L ++
Sbjct: 50  SSNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALE 109


>Glyma03g30250.3 
          Length = 309

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 45/60 (75%)

Query: 45  TVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           + ++ V ELL CPVC N MYPPIHQC NGHT+CS CK  VHN CP+C H+LGNI  L ++
Sbjct: 50  SSNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALE 109


>Glyma03g30250.2 
          Length = 309

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 45/60 (75%)

Query: 45  TVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           + ++ V ELL CPVC N MYPPIHQC NGHT+CS CK  VHN CP+C H+LGNI  L ++
Sbjct: 50  SSNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALE 109


>Glyma03g30250.1 
          Length = 309

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 45/60 (75%)

Query: 45  TVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNISALVVD 104
           + ++ V ELL CPVC N MYPPIHQC NGHT+CS CK  VHN CP+C H+LGNI  L ++
Sbjct: 50  SSNNGVYELLGCPVCKNLMYPPIHQCPNGHTLCSHCKVEVHNICPSCHHDLGNIRCLALE 109