Miyakogusa Predicted Gene
- Lj0g3v0114179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0114179.1 Non Chatacterized Hit- tr|B7FJB0|B7FJB0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.34,0,Cyclin-like,Cyclin-like; Cyclin,Cyclin PHO80-like; no
description,Cyclin-like; seg,NULL; SUBFAMILY N,CUFF.6703.1
(227 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g03990.1 389 e-108
Glyma01g32920.1 386 e-108
Glyma12g32200.1 135 3e-32
Glyma03g25640.1 132 3e-31
Glyma18g48330.1 132 4e-31
Glyma09g38070.1 131 5e-31
Glyma07g13200.1 131 7e-31
Glyma11g17150.1 112 3e-25
Glyma19g33860.1 103 1e-22
Glyma03g31030.1 103 2e-22
Glyma19g42390.1 100 1e-21
Glyma16g09060.1 95 6e-20
Glyma13g38270.1 94 9e-20
Glyma02g30710.1 94 9e-20
Glyma03g31030.2 75 4e-14
>Glyma03g03990.1
Length = 224
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/218 (86%), Positives = 197/218 (90%)
Query: 10 LTISPRKLRYDLYSYSYQEDSNTPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANI 69
+TISPRKLRYDLYSYSY+EDSNTPLVINVL+SLIER+MART+RIVKNCS SLSKAIS NI
Sbjct: 7 ITISPRKLRYDLYSYSYKEDSNTPLVINVLASLIERSMARTQRIVKNCSNSLSKAISTNI 66
Query: 70 FDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITT 129
FDCREIPD+TIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITT
Sbjct: 67 FDCREIPDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITT 126
Query: 130 IMVASKYVEDMNYRNSYFARVGGXXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLER 189
IMVASKYVEDMN+RNSYFARVGG MMGFKLHVNVSVFESYCCHLER
Sbjct: 127 IMVASKYVEDMNFRNSYFARVGGLTTNELNELELEFLFMMGFKLHVNVSVFESYCCHLER 186
Query: 190 EVSIGGGYHIERTLRCAEEIKTRQIEERGYTQIARVML 227
EVSIGGGYHIERTLRCAEEIK + IE RGYTQI RVML
Sbjct: 187 EVSIGGGYHIERTLRCAEEIKAKNIEGRGYTQITRVML 224
>Glyma01g32920.1
Length = 224
Score = 386 bits (992), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 196/218 (89%)
Query: 10 LTISPRKLRYDLYSYSYQEDSNTPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANI 69
LTISPRKLRYDLYSYSY+EDSNTPLVINVL+SLIER+MART+RIVKNCS +LSK IS NI
Sbjct: 7 LTISPRKLRYDLYSYSYKEDSNTPLVINVLASLIERSMARTQRIVKNCSNALSKVISTNI 66
Query: 70 FDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITT 129
FDCREIPDMTI+SYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRIN RNVHRLLITT
Sbjct: 67 FDCREIPDMTIESYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINTRNVHRLLITT 126
Query: 130 IMVASKYVEDMNYRNSYFARVGGXXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLER 189
IMVASKYVEDMN+RNSYFARVGG +MGFKLHVNVSVFESYCCHLER
Sbjct: 127 IMVASKYVEDMNFRNSYFARVGGLRTNELNELELEFLFLMGFKLHVNVSVFESYCCHLER 186
Query: 190 EVSIGGGYHIERTLRCAEEIKTRQIEERGYTQIARVML 227
EVSIGGGYHIERTLRCAEEIK + IEERGYTQI RVML
Sbjct: 187 EVSIGGGYHIERTLRCAEEIKAKNIEERGYTQITRVML 224
>Glyma12g32200.1
Length = 232
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 117/199 (58%), Gaps = 12/199 (6%)
Query: 31 NTPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISA--------NIFDCREIPDMTIQS 82
N P V+ VLSS++E+ +AR ++++ S+ L S N F P ++I
Sbjct: 24 NLPRVLCVLSSMLEKLVARNEKLIDILSQELDGLNSGSVRLGNSLNTFHGVRAPSISIPK 83
Query: 83 YLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNY 142
YLERI++YT PS +VV YVYIDR +P + + NVHRLL+T++MVASK ++D +Y
Sbjct: 84 YLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTSLNVHRLLVTSVMVASKMLDDEHY 143
Query: 143 RNSYFARVGGXXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLEREVSIGG-GYHIER 201
N+ +ARVGG ++ F++ V+ VFESYC HLE+E+ + G G IER
Sbjct: 144 NNAIYARVGGVSNAELNKLELELLFLLDFRVMVSSRVFESYCFHLEKEMVVNGTGMKIER 203
Query: 202 TL--RCAEEIKTR-QIEER 217
L + ++++T IE++
Sbjct: 204 ALTPKAMDDLETEISIEDK 222
>Glyma03g25640.1
Length = 209
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 27 QEDSNTPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLER 86
+ S P VI L SL+ER ++ L + ++F P+++IQ YLER
Sbjct: 7 ESPSVMPKVITFLCSLLERVAESNDH-----NQHLQQHQKISVFHGLTRPNISIQCYLER 61
Query: 87 IFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSY 146
IF+Y PS +VVAYVY+DRF Q P IN+ NVHRLLIT++MVA+K+++DM Y N++
Sbjct: 62 IFKYANCSPSCFVVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMFYNNAH 121
Query: 147 FARVGGXXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLEREV 191
+A+VGG +GF L+V F++YC HL+RE+
Sbjct: 122 YAKVGGITKVEMNFLELDFLFGLGFHLNVTPGTFQAYCVHLQREM 166
>Glyma18g48330.1
Length = 205
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 5/159 (3%)
Query: 33 PLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYTR 92
P +I+ LSSL++R +A + + N + L + +S +F P ++IQSYLERIF+Y
Sbjct: 11 PKLISFLSSLLKR-VAESNDL--NQQQLLHQKVS--VFHGLTRPTISIQSYLERIFKYAN 65
Query: 93 AGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARVGG 152
PS ++VAYVY+DRF Q P IN NVHRLLIT++MVA+K+++D+ Y N+Y+A+VGG
Sbjct: 66 CSPSCFIVAYVYLDRFTQRQPSLPINFFNVHRLLITSVMVAAKFMDDLYYNNAYYAKVGG 125
Query: 153 XXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLEREV 191
+GF L+V F++YC HL+ E+
Sbjct: 126 ITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEM 164
>Glyma09g38070.1
Length = 188
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 33 PLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYTR 92
P +I+ LSSL++R +A + + N + + + +S +F P ++IQSYLERIF+Y
Sbjct: 11 PKLISFLSSLLKR-VAESNDL--NQQQLIHQKVS--VFHGLTRPTISIQSYLERIFKYAN 65
Query: 93 AGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARVGG 152
PS ++VAYVY+DRF Q P IN+ NVHRLLIT++MVA+K+++D+ Y N+Y+A+VGG
Sbjct: 66 CSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDLYYNNAYYAKVGG 125
Query: 153 XXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLEREV 191
+GF L+V F++YC HL+ E+
Sbjct: 126 ITTIEMNFLEVDFLFGLGFHLNVTPGTFQAYCAHLQSEM 164
>Glyma07g13200.1
Length = 202
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 8/159 (5%)
Query: 33 PLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYTR 92
P VI LSSL+ER V + + ++F P+++I SYLERIF+Y
Sbjct: 11 PKVITFLSSLLER--------VAESNDHNQQHQKISVFHGLTRPNISIHSYLERIFKYAN 62
Query: 93 AGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARVGG 152
PS +VVAYVY+DRF Q P IN NVHRLLIT++MVA+K+++DM Y N+Y+A+VGG
Sbjct: 63 CSPSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGG 122
Query: 153 XXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLEREV 191
+GF L+V F++YC +L+RE+
Sbjct: 123 ITKIEMNFLELDFLFGLGFHLNVTPGTFQAYCVNLQREM 161
>Glyma11g17150.1
Length = 59
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 54/59 (91%)
Query: 169 MGFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIKTRQIEERGYTQIARVML 227
M FKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIK + EERGYT IARVML
Sbjct: 1 MDFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIKAKHREERGYTHIARVML 59
>Glyma19g33860.1
Length = 246
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 69 IFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLIT 128
+F P ++++ Y++RIF+Y+ PS +VVA++Y+DRF Q+ ++ + NVHRLLIT
Sbjct: 92 VFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTE-IKLTSLNVHRLLIT 150
Query: 129 TIMVASKYVEDMNYRNSYFARVGGXXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLE 188
+IM+A+K+++D Y N+Y+A+VGG + F+L V V F YC LE
Sbjct: 151 SIMLAAKFIDDAFYNNAYYAKVGGVSTSELNRFEMSFLFGIDFRLQVGVETFGRYCRQLE 210
Query: 189 REVS 192
+E +
Sbjct: 211 KEAA 214
>Glyma03g31030.1
Length = 217
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 31 NTPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRY 90
P V+++LSSL+ER++ R + +++ ++ + ++ +F P ++++ Y++RIF+Y
Sbjct: 29 GVPRVLSLLSSLLERSVQRNETLLE--AKHVKDVVT--VFHGLRAPTLSVRKYIDRIFKY 84
Query: 91 TRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARV 150
+ PS +VVA++Y+DRF Q+ ++ + NVHRLLIT+IM+A+K+++D Y N+Y+A+V
Sbjct: 85 SGCSPSCFVVAHIYVDRFIQHTE-IKLTSLNVHRLLITSIMLAAKFIDDAFYNNAYYAKV 143
Query: 151 GGXXXXXXXXXXXXXXXMMGFKLHVNVSVFESYCCHLEREVS 192
GG + F+L +V F YC LE+E +
Sbjct: 144 GGVSTSELNRLEMSFLFGIDFRLQFSVDTFGRYCRQLEKEAA 185
>Glyma19g42390.1
Length = 149
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
Query: 32 TPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYT 91
TPLV+ LSS ER++ + ++++ + K IF + P++++ Y+ERI +Y+
Sbjct: 1 TPLVLLNLSSNWERSILKNEKLLLTTRK---KNDPVTIFHGSKAPNLSVTHYMERILKYS 57
Query: 92 RAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARVG 151
PS +V+A +Y+DRF Q G+ + + N HRLLIT++MVA K+++D Y N+Y+A+VG
Sbjct: 58 HCSPSCFVIAQIYMDRFFQKKGGY-LTSFNAHRLLITSVMVAVKFLDDKYYSNAYYAKVG 116
Query: 152 GXXXXXXXXXXXXXXXMMGFKLHVNVSVFESY 183
G + F+L V +F Y
Sbjct: 117 GVSTEEMNRMELEFLFNLEFRLFVTTELFLKY 148
>Glyma16g09060.1
Length = 154
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 8/106 (7%)
Query: 35 VINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYTRAG 94
+I LSSL+ER V + + ++F P+++IQSYLERIF+Y
Sbjct: 1 MIAFLSSLLER--------VAESNDHNQQHQKISVFHGLTRPNISIQSYLERIFKYANCN 52
Query: 95 PSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDM 140
PS +VVAYVY+DRF Q P IN NVHRLLIT++MVA+K+++DM
Sbjct: 53 PSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDM 98
>Glyma13g38270.1
Length = 141
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 18 RYDLYSYSYQEDS-----NTPLVINVLSSLIERNMARTKRIVKNCSRSLSK--------A 64
Y +S+ Q ++ N P V+ +LSS++E+ +AR +++V S+ L
Sbjct: 6 EYSNHSWPLQPETSLTELNLPRVLCILSSMLEKLVARNEKLVDILSQQLDGLNCGSVRLG 65
Query: 65 ISANIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHR 124
S N F P ++I YLERI++YT PS +VV YVYIDR +P + + NVHR
Sbjct: 66 NSLNTFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVTSLNVHR 125
Query: 125 LLITTIMVASKYVED 139
LL+T++MVASK ++D
Sbjct: 126 LLVTSVMVASKMLDD 140
>Glyma02g30710.1
Length = 98
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 8/106 (7%)
Query: 35 VINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYTRAG 94
+I LSSL+ER V + + ++F P+++IQSYLERIF+Y
Sbjct: 1 MIAFLSSLLER--------VAESNDHNQQHQKISVFHGLTRPNISIQSYLERIFKYANCS 52
Query: 95 PSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDM 140
PS +VVAYVY+DRF Q P IN NVHRLLIT++MVA+K+++DM
Sbjct: 53 PSCFVVAYVYLDRFTQRQPSLPINTFNVHRLLITSVMVAAKFMDDM 98
>Glyma03g31030.2
Length = 148
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 68 NIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLI 127
+F P ++++ Y++RIF+Y+ PS +VVA++Y+DRF Q+ ++ + NVHRLLI
Sbjct: 62 TVFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTE-IKLTSLNVHRLLI 120
Query: 128 TTIMVASKYVEDM 140
T+IM+A+K+++D+
Sbjct: 121 TSIMLAAKFIDDI 133