Miyakogusa Predicted Gene

Lj0g3v0113449.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0113449.1 Non Chatacterized Hit- tr|I3T5E9|I3T5E9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.6,0,HTH_CROC1,Helix-turn-helix type 3; no description,Lambda
repressor-like, DNA-binding domain; lambda ,CUFF.6770.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g15420.1                                                       239   6e-64
Glyma06g42900.1                                                       236   5e-63
Glyma06g42890.1                                                       236   5e-63
Glyma12g15410.1                                                       131   3e-31

>Glyma12g15420.1 
          Length = 142

 Score =  239 bits (610), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 127/143 (88%), Positives = 139/143 (97%), Gaps = 1/143 (0%)

Query: 1   MSGAGGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSG 60
           MSG G P+SQDWEPVVLRKKAPTAAA+KD+KAVNAARR+GA+IET++K+NAGTNKAASS 
Sbjct: 1   MSGVG-PLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSS 59

Query: 61  TSLNTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGK 120
           TSLNTKRLD+DTENL H++VPTELKKAIMQARMDKKLTQAQLAQ+INEKPQVIQEYESGK
Sbjct: 60  TSLNTKRLDDDTENLAHEKVPTELKKAIMQARMDKKLTQAQLAQLINEKPQVIQEYESGK 119

Query: 121 AIPNQQIIGKLERALGAKLRGKK 143
           AIPNQQIIGKLERALGAKLRGKK
Sbjct: 120 AIPNQQIIGKLERALGAKLRGKK 142


>Glyma06g42900.1 
          Length = 142

 Score =  236 bits (603), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 125/143 (87%), Positives = 139/143 (97%), Gaps = 1/143 (0%)

Query: 1   MSGAGGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSG 60
           MSG G P+SQDWEPVVLRKKAPTAAA+KD+KAVNAARR+GA+IET++K+NAGTNKAASS 
Sbjct: 1   MSGVG-PLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSS 59

Query: 61  TSLNTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGK 120
           TSLNTKRLD+DTE+L H++VPTELKKAIMQARMDKKLTQ+QLAQ+INEKPQVIQEYESGK
Sbjct: 60  TSLNTKRLDDDTESLAHEKVPTELKKAIMQARMDKKLTQSQLAQLINEKPQVIQEYESGK 119

Query: 121 AIPNQQIIGKLERALGAKLRGKK 143
           AIPNQQIIGKLERALGAKLRGKK
Sbjct: 120 AIPNQQIIGKLERALGAKLRGKK 142


>Glyma06g42890.1 
          Length = 142

 Score =  236 bits (603), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 125/143 (87%), Positives = 139/143 (97%), Gaps = 1/143 (0%)

Query: 1   MSGAGGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSG 60
           MSG G P+SQDWEPVVLRKKAPTAAA+KD+KAVNAARR+GA+IET++K+NAGTNKAASSG
Sbjct: 1   MSGVG-PLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSG 59

Query: 61  TSLNTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGK 120
           TSLNTKRLD+DTE+L H++VPTELKKAIMQARMDKKLTQ+QLAQ+INEKPQVIQEYESGK
Sbjct: 60  TSLNTKRLDDDTESLAHEKVPTELKKAIMQARMDKKLTQSQLAQLINEKPQVIQEYESGK 119

Query: 121 AIPNQQIIGKLERALGAKLRGKK 143
           AIPNQQII KLERALGAKLRGKK
Sbjct: 120 AIPNQQIISKLERALGAKLRGKK 142


>Glyma12g15410.1 
          Length = 120

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/138 (59%), Positives = 96/138 (69%), Gaps = 18/138 (13%)

Query: 6   GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGTSLNT 65
           GP+S DWEPVVLRKKAPTAAA+KD+KAV +       +  +               SL  
Sbjct: 1   GPLSLDWEPVVLRKKAPTAAAKKDEKAVFSIIFLLDFVTQIY-------------VSLKF 47

Query: 66  KRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQ 125
           K+         +++VPTELKKAIMQARMDKKLTQ+QLAQ+IN+KPQVIQEYESGKAI NQ
Sbjct: 48  KK-----NACMYEKVPTELKKAIMQARMDKKLTQSQLAQLINKKPQVIQEYESGKAILNQ 102

Query: 126 QIIGKLERALGAKLRGKK 143
            IIGKL + LGAKLR KK
Sbjct: 103 HIIGKLGKVLGAKLRDKK 120