Miyakogusa Predicted Gene

Lj0g3v0113419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0113419.1 Non Chatacterized Hit- tr|K3YRZ9|K3YRZ9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017043,42.86,4e-19,seg,NULL; NHL REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL; no description,Six-bladed beta-,CUFF.6592.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g01410.1                                                       192   8e-50
Glyma01g03880.1                                                       184   4e-47
Glyma02g03810.1                                                       179   7e-46
Glyma18g18550.1                                                       176   6e-45
Glyma08g39910.1                                                       156   6e-39
Glyma13g34350.1                                                       116   1e-26
Glyma12g36000.1                                                        81   4e-16
Glyma18g49200.1                                                        70   8e-13
Glyma08g39920.2                                                        56   1e-08
Glyma08g39920.1                                                        56   1e-08

>Glyma19g01410.1 
          Length = 536

 Score =  192 bits (489), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 112/159 (70%), Positives = 125/159 (78%), Gaps = 5/159 (3%)

Query: 1   MSRSCYVLVF-XXXXXXXXXXXXXXXXXXKIVTGVVSNVVSALVKWLWSL--KSTAKP-- 55
           MS+SC VL+F                   K+VTGVVSNVVSAL+KWLWSL  KST KP  
Sbjct: 1   MSKSCSVLLFGFVLVLCLFSPTSATPPPAKVVTGVVSNVVSALIKWLWSLSVKSTTKPGR 60

Query: 56  VQHGRSMMKFESGYNVETIFDGSKLGFEPHSVEVSPDGEFLVLDSENSNIYKIPSPISRY 115
           VQH RSM+KFESGY+VETIFDGS+LG EPHSV++SP+GEFLVLDSENSNIYK+   +SRY
Sbjct: 61  VQHSRSMVKFESGYSVETIFDGSQLGIEPHSVKISPNGEFLVLDSENSNIYKVSGSMSRY 120

Query: 116 SRPKLLAGSPEGYIGHIDGRLREARMNHPKGITVDGRGN 154
           SRPKLLAGS EG IGHIDGR REARMNHPKG+TVD RGN
Sbjct: 121 SRPKLLAGSAEGNIGHIDGRPREARMNHPKGLTVDDRGN 159


>Glyma01g03880.1 
          Length = 507

 Score =  184 bits (467), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 87/126 (69%), Positives = 101/126 (80%)

Query: 29  KIVTGVVSNVVSALVKWLWSLKSTAKPVQHGRSMMKFESGYNVETIFDGSKLGFEPHSVE 88
           KIV+G +SN V A  KW+WSLK+  K     +SMMKFESGY VET+FDGSKLG EP++VE
Sbjct: 30  KIVSGFLSNAVPAFTKWVWSLKAPTKTAIGAKSMMKFESGYTVETVFDGSKLGIEPYAVE 89

Query: 89  VSPDGEFLVLDSENSNIYKIPSPISRYSRPKLLAGSPEGYIGHIDGRLREARMNHPKGIT 148
           V P+GE L+LDS NSNIY+I S +S  SRPKL+AGS EGY GH+DGR REARMNHPKGIT
Sbjct: 90  VLPNGELLILDSANSNIYRISSSLSLNSRPKLVAGSAEGYSGHVDGRFREARMNHPKGIT 149

Query: 149 VDGRGN 154
           VD RGN
Sbjct: 150 VDNRGN 155


>Glyma02g03810.1 
          Length = 509

 Score =  179 bits (455), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 85/126 (67%), Positives = 100/126 (79%)

Query: 29  KIVTGVVSNVVSALVKWLWSLKSTAKPVQHGRSMMKFESGYNVETIFDGSKLGFEPHSVE 88
           KIV+G +SN V A  KW+WSLK+  K     +SMMKFESGY VET+FDGSKLG EP++VE
Sbjct: 30  KIVSGFLSNAVPAFTKWVWSLKAPTKTAIGAKSMMKFESGYTVETVFDGSKLGIEPYAVE 89

Query: 89  VSPDGEFLVLDSENSNIYKIPSPISRYSRPKLLAGSPEGYIGHIDGRLREARMNHPKGIT 148
           V  +GE L+LDS NSNIY+I S +S  +RPKL+AGS EGY GH+DGRLREARMNHPKGI 
Sbjct: 90  VLANGELLILDSANSNIYRISSSLSLNTRPKLVAGSAEGYSGHVDGRLREARMNHPKGIA 149

Query: 149 VDGRGN 154
           VD RGN
Sbjct: 150 VDNRGN 155


>Glyma18g18550.1 
          Length = 453

 Score =  176 bits (447), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 94/110 (85%)

Query: 45  WLWSLKSTAKPVQHGRSMMKFESGYNVETIFDGSKLGFEPHSVEVSPDGEFLVLDSENSN 104
           W+WSLK+T K     RSMMKFESGYNVET+FDGSKLG EP++VEV P+GE L+LDS NSN
Sbjct: 1   WVWSLKATTKTAVSSRSMMKFESGYNVETVFDGSKLGIEPYAVEVLPNGELLILDSANSN 60

Query: 105 IYKIPSPISRYSRPKLLAGSPEGYIGHIDGRLREARMNHPKGITVDGRGN 154
           IY+I S +S YSRPKL+AGS EGY GH+DG+LREARMNHPKGITVD RGN
Sbjct: 61  IYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGN 110


>Glyma08g39910.1 
          Length = 515

 Score =  156 bits (395), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 96/145 (66%), Gaps = 19/145 (13%)

Query: 29  KIVTGVVSNVVSALVKWLWSLKSTAKPVQHGRSMMKFESGYNVETIFDGSKLGFEPHSVE 88
           KIV+G +SN V A  KW+WSLK+T K     RSMMKFESGYNVET+FDGSKLG EP++VE
Sbjct: 29  KIVSGFLSNAVPAFTKWVWSLKATTKTAVSSRSMMKFESGYNVETVFDGSKLGIEPYAVE 88

Query: 89  VSPDGEFLVLDSENSNIYKIPSPISRY-------------------SRPKLLAGSPEGYI 129
           V P+GE L+LDS NSNIY+I S +S Y                   + P  L    +G +
Sbjct: 89  VLPNGELLILDSANSNIYRISSSLSLYCCQFEFDPLHHIFWCLHNTADPSWLQDQLKGIL 148

Query: 130 GHIDGRLREARMNHPKGITVDGRGN 154
              DG+LREARM+HPKGITVD RGN
Sbjct: 149 DMFDGKLREARMSHPKGITVDDRGN 173


>Glyma13g34350.1 
          Length = 503

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 85/117 (72%), Gaps = 4/117 (3%)

Query: 39  VSALVKWLWSLKSTAKPVQHGRSMMKFESGYNVETIFDGSKLGFEPHSVEVSP-DGEFLV 97
           +S+L+KW    +ST+K      ++++FE+GY VET+ +G+++G  P+ + VS  DGE   
Sbjct: 36  ISSLIKWT---RSTSKTPHSDGNVLQFENGYVVETVVEGNEIGVVPYRIRVSEEDGELFA 92

Query: 98  LDSENSNIYKIPSPISRYSRPKLLAGSPEGYIGHIDGRLREARMNHPKGITVDGRGN 154
           +D+ NSNI +I  P+S+YSR +L+AGS +GY GH+DG+  +AR NHPKGITVD +GN
Sbjct: 93  VDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITVDDKGN 149


>Glyma12g36000.1 
          Length = 566

 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 10/123 (8%)

Query: 39  VSALVKWLWSLKSTAKPVQHGRSM-MKFESGYNVETI------FDGSKLGFEPHSVEVSP 91
           +S+L+KW    +ST+K    G  + +     +N++ +      +  ++LG          
Sbjct: 37  LSSLIKWT---RSTSKTPHSGVCVCVCMGMLFNLKMVTWWRLLWKETRLGLSLTGSVSQE 93

Query: 92  DGEFLVLDSENSNIYKIPSPISRYSRPKLLAGSPEGYIGHIDGRLREARMNHPKGITVDG 151
           DGE   +D+ NSNI  I  P+S+YSR +L+AGS +GY GH+DG+  +A  NHPKGITVD 
Sbjct: 94  DGELFAVDAINSNIVWITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDALFNHPKGITVDD 153

Query: 152 RGN 154
           +GN
Sbjct: 154 KGN 156


>Glyma18g49200.1 
          Length = 220

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 39/47 (82%)

Query: 59  GRSMMKFESGYNVETIFDGSKLGFEPHSVEVSPDGEFLVLDSENSNI 105
            +SMMKFESGY+VE +FDGS+LG EP++VEV P+GE L+LDS N  +
Sbjct: 111 AKSMMKFESGYSVEIVFDGSELGIEPYAVEVLPNGELLILDSANRCL 157


>Glyma08g39920.2 
          Length = 392

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 66  ESGYNVETIFDGSKLGFEPHSVEVSP-DGEFLVLDSENSNIYKIPSPISRYSRPKLLAGS 124
           E GY V T+FDG K    P +V   P   + ++LDS NS  Y    PI+  S    L+G 
Sbjct: 27  EEGYTVTTVFDGHKPHIFPFTVLQRPFSSDLILLDSVNSTFYTAQFPITEESVFTRLSG- 85

Query: 125 PEGYIGHIDGRLREARMNHPKGITVDGRGN 154
            +G +G+ DG +  AR   P+    D RGN
Sbjct: 86  -DGSVGYSDGDVGSARFAKPRSFAFDMRGN 114


>Glyma08g39920.1 
          Length = 400

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 66  ESGYNVETIFDGSKLGFEPHSVEVSP-DGEFLVLDSENSNIYKIPSPISRYSRPKLLAGS 124
           E GY V T+FDG K    P +V   P   + ++LDS NS  Y    PI+  S    L+G 
Sbjct: 27  EEGYTVTTVFDGHKPHIFPFTVLQRPFSSDLILLDSVNSTFYTAQFPITEESVFTRLSG- 85

Query: 125 PEGYIGHIDGRLREARMNHPKGITVDGRGN 154
            +G +G+ DG +  AR   P+    D RGN
Sbjct: 86  -DGSVGYSDGDVGSARFAKPRSFAFDMRGN 114