Miyakogusa Predicted Gene

Lj0g3v0112549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112549.1 Non Chatacterized Hit- tr|I1LCE6|I1LCE6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53726
PE,56.76,4e-19,seg,NULL,CUFF.6531.1
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34310.1                                                        91   2e-19
Glyma10g33340.1                                                        87   3e-18
Glyma10g27640.1                                                        79   1e-15
Glyma20g21600.1                                                        78   2e-15

>Glyma20g34310.1 
          Length = 109

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 8/89 (8%)

Query: 1  MDTE-STKDANGCCVNKPXXXXXX---XSLDGGKVEDHANGDSDSHSNSLLALPRGGLSR 56
          MDT+ STKD NGC +NKP          SL+G KVEDH+N + +S SNSLL + +GG++R
Sbjct: 1  MDTKKSTKDTNGC-INKPMAVTVTLTVASLEGRKVEDHSNREDESDSNSLLPVRKGGIAR 59

Query: 57 KSENKTY--RRVQWNDALGNKLVEVLEYE 83
          KS+ KTY  R+VQWND +GNKLVEVLEYE
Sbjct: 60 KSD-KTYRKRKVQWNDRIGNKLVEVLEYE 87


>Glyma10g33340.1 
          Length = 108

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/90 (62%), Positives = 64/90 (71%), Gaps = 9/90 (10%)

Query: 1  MDTE-STKDANGCCVNKP---XXXXXXXSLDGGKVEDHANGDSDSHSNSLLALPRGGLSR 56
          MDT+ STKD NGC VNKP          SL+G KVED  N + DS SNSLL L +GG+SR
Sbjct: 1  MDTKKSTKDTNGC-VNKPMALTMTLTVASLEGRKVEDR-NKEDDSDSNSLLPLRKGGISR 58

Query: 57 KSENKTYRR--VQWNDALGNKLVEVLEYEA 84
          KS+ KTYR+  VQWND +GNKLVEVLEYE 
Sbjct: 59 KSD-KTYRKRKVQWNDRIGNKLVEVLEYEP 87


>Glyma10g27640.1 
          Length = 80

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 52/79 (65%), Gaps = 2/79 (2%)

Query: 6  TKDANGCCVNKPXXXXXXXSLDGGKVEDHANGDSDSHSNSLLALPRGGLSRKSENKTYRR 65
          +KD NGC ++K        SL   KVEDH NG+ DS SNSLL   RGG+SR  E KT R+
Sbjct: 3  SKDINGCLMDK-HKPVVTSSLVCEKVEDHVNGEDDSDSNSLLPPRRGGMSRNCE-KTRRK 60

Query: 66 VQWNDALGNKLVEVLEYEA 84
          VQWND  GNKL EVLEYE 
Sbjct: 61 VQWNDRNGNKLAEVLEYEP 79


>Glyma20g21600.1 
          Length = 113

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 54/84 (64%), Gaps = 5/84 (5%)

Query: 1  MDTESTKDANGCCVNKPXXXXXXXSLDGGKVEDHANGDSDSHSNSLLALPRGGLSRKSEN 60
          MD+E   D NGC ++K        SL   KVEDH NG+ DS SNSLL   RGG+SR  E 
Sbjct: 1  MDSE---DVNGCLMDK-HKPVVASSLVCEKVEDHVNGEDDSDSNSLLPPRRGGMSRNCE- 55

Query: 61 KTYRRVQWNDALGNKLVEVLEYEA 84
          KT R+VQWND  GNKL EVLEYE 
Sbjct: 56 KTRRKVQWNDRNGNKLAEVLEYEP 79