Miyakogusa Predicted Gene

Lj0g3v0112359.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112359.1 tr|A9RFZ1|A9RFZ1_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,67.5,5e-18,SUBFAMILY NOT NAMED,NULL; HEMOLYSIN-RELATED,NULL;
DUF21,Domain of unknown function DUF21; seg,NULL,CUFF.6515.1
         (229 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01920.1                                                       200   1e-51
Glyma02g46780.1                                                       189   2e-48
Glyma14g16850.1                                                        61   8e-10

>Glyma14g01920.1 
          Length = 710

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/232 (50%), Positives = 144/232 (62%), Gaps = 21/232 (9%)

Query: 1   MALQSLVLGQPVFIFVSRV----HR-----MPMKALAKNSGYPFPLVAKCVEQPCNFGGV 51
           MAL+S VL   VF   SR+    H      +P+K L +N+ YPFP V  CV  P  F  +
Sbjct: 2   MALESWVLSHQVFTSSSRLFYPAHENRRKSLPIKVLGRNTRYPFPFVPNCV-APSTFARL 60

Query: 52  SSILGSGSDFKPFGRCDMRCLVTSGKDLSGTKSSNDVSEEDMKFPKFVGELVKKGIVLAA 111
            +    G+D K   R  +RCL +S   LS     N VS+ ++ F   + EL+K+GI+LAA
Sbjct: 61  QAS-SFGTDAKLLDRTKLRCLGSSSDCLS---DRNAVSKANLNF---IQELLKRGIILAA 113

Query: 112 TVCGVLMFGCERAFAMEGLVS----VMEQSKVFFRNAWPKVLPVLQIFKEQGXXXXXXXX 167
           TVCGVL+FGC R FA+EG+ +    V  QS +   N WPKVL VL+IFKEQG        
Sbjct: 114 TVCGVLVFGCSRVFAVEGVANAGYGVFGQSILLLTNTWPKVLQVLRIFKEQGLVLAVLLG 173

Query: 168 XXXXXXMAETSITTLWPWKVRELANNDSENGVFKLLRSDVTRFLTTILIGTT 219
                 MAETSITTLWPWKVRELA  + ENGVF+LLRSDVTRFLTTILIGTT
Sbjct: 174 LSAFFSMAETSITTLWPWKVRELAEKEPENGVFRLLRSDVTRFLTTILIGTT 225


>Glyma02g46780.1 
          Length = 666

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/232 (49%), Positives = 143/232 (61%), Gaps = 21/232 (9%)

Query: 1   MALQSLVLGQPVFIFVSRV----HR-----MPMKALAKNSGYPFPLVAKCVEQPCNFGGV 51
           M L+S VL   +F   SR+    H      +P+K L +N+ Y FP V  CV  P +F  +
Sbjct: 2   MTLESWVLSHQMFSSSSRLFYPAHENRRKSLPIKVLGRNTRYSFPFVPNCV-APSSFTRL 60

Query: 52  SSILGSGSDFKPFGRCDMRCLVTSGKDLSGTKSSNDVSEEDMKFPKFVGELVKKGIVLAA 111
            +     +D K   R  +RCL +S   LS     N VS  ++     + EL+K+GI+LAA
Sbjct: 61  HAS-SFEADAKLQDRTRLRCLGSSSDCLS---DRNVVSNSNLNC---IQELLKRGIILAA 113

Query: 112 TVCGVLMFGCERAFAMEGLVS----VMEQSKVFFRNAWPKVLPVLQIFKEQGXXXXXXXX 167
           TVCG+L+FGC R FA+EG+V+    V  QS +  RN WPKVL VL+IFKEQG        
Sbjct: 114 TVCGLLVFGCSRVFAVEGVVNAGYGVFGQSILLLRNTWPKVLQVLRIFKEQGLVLAVLLG 173

Query: 168 XXXXXXMAETSITTLWPWKVRELANNDSENGVFKLLRSDVTRFLTTILIGTT 219
                 MAETSITTLWPWKVRELA  +SENGVF+LLRSDVTRFLTTILIGTT
Sbjct: 174 LSAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTT 225


>Glyma14g16850.1 
          Length = 126

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 31/34 (91%)

Query: 186 KVRELANNDSENGVFKLLRSDVTRFLTTILIGTT 219
           KVRELA  + ENGVF+LLRSDVTRFLTTILIGTT
Sbjct: 3   KVRELAEKEPENGVFRLLRSDVTRFLTTILIGTT 36