Miyakogusa Predicted Gene

Lj0g3v0112089.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112089.2 tr|D7M1V6|D7M1V6_ARALL Thioredoxin family protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_,60.47,4e-19,seg,NULL; GLUTAREDOXIN_2,Glutaredoxin;
GLUTAREDOXIN-3,NULL; GLUTAREDOXIN-RELATED PROTEIN,Monothiol
g,CUFF.6497.2
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24880.1                                                       106   4e-24
Glyma08g45190.1                                                        67   3e-12

>Glyma13g24880.1 
          Length = 490

 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 57/85 (67%)

Query: 1   MHESGELHEFFKDHGIGTVGETKLTESGNAXXXXXXXXXXXXXXXXWLENLVNSSPVILF 60
           MHESGEL E FKDHGI T  E K  ESGN                  LE+LVNSS V+LF
Sbjct: 242 MHESGELKEVFKDHGIDTTNEAKEKESGNGKGGISKSTDLSTTLSSRLESLVNSSAVMLF 301

Query: 61  MKGKPDEPKCGFRRKVVEILQQENV 85
           MKGKPDEPKCGF RKVVEILQQENV
Sbjct: 302 MKGKPDEPKCGFSRKVVEILQQENV 326



 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 32/38 (84%)

Query: 48  LENLVNSSPVILFMKGKPDEPKCGFRRKVVEILQQENV 85
           ++ LV+S+PV+LFMKG P+EPKCGF RKVV +L +E V
Sbjct: 160 IQQLVDSNPVMLFMKGTPEEPKCGFSRKVVVVLNEERV 197



 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 31/40 (77%)

Query: 48  LENLVNSSPVILFMKGKPDEPKCGFRRKVVEILQQENVSL 87
           L+NL+ SSPV+LFMKG PD P+CGF  +V + L+QE ++ 
Sbjct: 396 LKNLIASSPVMLFMKGTPDAPRCGFSSRVADALRQEGLNF 435


>Glyma08g45190.1 
          Length = 225

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 45/83 (54%), Gaps = 14/83 (16%)

Query: 3   ESGELHEFFKDHGIGTVGETKLTESGNAXXXXXXXXXXXXXXXXWLENLVNSSPVILFMK 62
           ++GEL E FKDHGI T+ E K    G                   L   ++S      MK
Sbjct: 93  KNGELKEVFKDHGIDTINEAKEKGDGKGGISKSTD----------LSTTLSSR----LMK 138

Query: 63  GKPDEPKCGFRRKVVEILQQENV 85
           GKPDEPKCGF RKVVEILQQENV
Sbjct: 139 GKPDEPKCGFSRKVVEILQQENV 161



 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query: 48 LENLVNSSPVILFMKGKPDEPKCGFRRKVVEILQQENVSL 87
          ++ LV+S+PV+LFMKG P+EPKCGF RK V++L++E V  
Sbjct: 38 IQQLVDSNPVMLFMKGTPEEPKCGFSRKAVDVLKEERVKF 77