Miyakogusa Predicted Gene

Lj0g3v0111659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0111659.1 tr|A0EFD6|A0EFD6_PARTE Chromosome undetermined
scaffold_93, whole genome shotgun sequence OS=Paramec,32.3,7e-17,no
description,Tetratricopeptide-like helical; seg,NULL;
TPR-like,NULL,CUFF.6463.1
         (1159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g26550.1                                                       485   e-136

>Glyma05g26550.1 
          Length = 628

 Score =  485 bits (1249), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 305/646 (47%), Positives = 400/646 (61%), Gaps = 107/646 (16%)

Query: 528  MKLGDRFQKKNGRLVFVDIDSFVSSAQSYWSSELLSVGIAVLRNLEALYKFSVKTDLSDF 587
            MKLGDRF KKNGRLV VD+   VS+A+SYWSS+L+SVG+ VL  L+ALYKFS    LS+F
Sbjct: 1    MKLGDRFLKKNGRLVSVDVQDLVSAAESYWSSQLVSVGMKVLHILDALYKFSASKALSEF 60

Query: 588  CQFQSLLHIYEVSEFLLGSKCFSHTHGNLKTLDKFRRLPIDRSLRYIVPLDWKKSLTKDM 647
            CQF+SL  IY+V +FLL SKCF+  HGNLKTL+KF R PIDRSL Y+VPLDW KSL KDM
Sbjct: 61   CQFRSLFLIYDVFKFLLKSKCFNLNHGNLKTLEKFSRTPIDRSLCYLVPLDWSKSLIKDM 120

Query: 648  VFLRTTEACKGLLKDAIYENIRLKDRLTYGQIGRVAVMVLGTASLLNELYVEIMTRFEDS 707
            V+LRTTE C+ L+KD IYENI  KD LTYGQIG V VM+LGTA+L +EL+V+I+ RF+++
Sbjct: 121  VYLRTTETCQDLVKDVIYENINRKDMLTYGQIGNVVVMILGTANLKSELFVKILARFKEN 180

Query: 708  IHWKKFIQ--QWSSAQEISQRNDSFAERNHVLSLYEALEHTYNVKWIKETDYLSPSCFMY 765
              W++FIQ    +SAQ+ S  +++      V + Y+AL++TY+V W +E DY+SPSCFMY
Sbjct: 181  PLWQEFIQSLHLNSAQKNSHVDEA------VENFYKALQYTYSVNWTREIDYISPSCFMY 234

Query: 766  LVERLLLLASCGK-KGFMFATKSSFIEWLNFQDENSLANLSLTPGMNMTDVHKFIARVLQ 824
            L++RLLLL S GK KGF+FATKSSF+EWL  QDENS  NLS+   +     H        
Sbjct: 235  LLDRLLLLTSHGKWKGFIFATKSSFVEWLIHQDENSFPNLSVMADVQSGGEH-------- 286

Query: 825  ELIYNQNDTINWIRKSNLDVKNYLPLFVLRLVVSVCLLHLSTRKYGETLCILLGNSHITS 884
                                       + RL+VS+CLLHLS+ KY E L  LL  +H+ S
Sbjct: 287  ---------------------------IHRLIVSLCLLHLSSGKYLELLHNLLKKNHVLS 319

Query: 885  QLPLEFCDVLMKGRGNLGLEVFSEAFKVIGNPLVIVKVGNSSSEIVCPDAVFVDFMVCRQ 944
            QLPLEF +VL KGR +L L+VF+EAFK+IGNPLV+ +  N+SSEI+CPDAVFVD  +C Q
Sbjct: 320  QLPLEFRNVLQKGRNHLVLKVFAEAFKLIGNPLVVARFHNTSSEILCPDAVFVDLTIC-Q 378

Query: 945  KELILQMLFPDRVDDSIGGENAAIIVESSDSTSKETPSRAFPYLYPNFGXXXXXXXXXXX 1004
            ++ IL++LFP+RV DS+  E AA++ E+SDSTSKE  S      +PN             
Sbjct: 379  RKFILEVLFPNRV-DSVDEETAAVL-EASDSTSKEFSSTNCSS-FPN-------KSSPIV 428

Query: 1005 TIQKADFNRE----SPDSNMVKAKIIKRWLKL--KSFH----LQDLLYPCIKFLATLHKV 1054
            T Q +D  RE    S +++   A +   W  +  K  H     ++LL   I  L+  H +
Sbjct: 429  TAQTSD--REIIGMSTNADSFWATMNNLWFAIDHKVLHNSTITKELLNIWIDGLS--HGM 484

Query: 1055 SYALNEVPHNL-TKNEMDELVALIGEMDQLYSTLNAKNASNSSRTTGTETQTFILRAGPD 1113
              +L+E P NL  KNE++E+V L+ EM QL+S L          T+G             
Sbjct: 485  HGSLSENPVNLDDKNEVEEVVNLLDEMKQLFSAL---------ATSGD------------ 523

Query: 1114 IESPCWETVSKPTNPLQTKEKHIIVEESAKKIIARRPKVEPSLKKL 1159
                               E H  + E  K+I++RRPKV   + KL
Sbjct: 524  ----------------GAIENHAQIGELCKRILSRRPKVGHVMNKL 553