Miyakogusa Predicted Gene

Lj0g3v0109839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109839.1 Non Chatacterized Hit- tr|D7MNU4|D7MNU4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,68.97,2e-17,seg,NULL,CUFF.6323.1
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06360.1                                                        93   7e-20

>Glyma02g06360.1 
          Length = 259

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/47 (87%), Positives = 42/47 (89%)

Query: 18  AHTRRWKKESVFFKKARKHFNVDVLHVDTPSNGSRVGVVVYRFVGKG 64
           AH RRWKKES FFKKARKHFNVDVLH DTP +GSRVGVVVYRFV KG
Sbjct: 213 AHMRRWKKESAFFKKARKHFNVDVLHTDTPCDGSRVGVVVYRFVAKG 259