Miyakogusa Predicted Gene

Lj0g3v0109269.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109269.2 tr|A9SNA0|A9SNA0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_58253
,58.21,3e-17, ,CUFF.6276.2
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g45110.1                                                       153   3e-38
Glyma07g05310.1                                                       130   4e-31
Glyma07g05310.2                                                       129   6e-31
Glyma16g01860.1                                                       123   5e-29
Glyma02g21800.1                                                       101   2e-22
Glyma03g42320.1                                                        73   8e-14
Glyma15g18080.1                                                        57   6e-09

>Glyma19g45110.1 
          Length = 231

 Score =  153 bits (387), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/83 (86%), Positives = 76/83 (91%)

Query: 1   MTGIHLCYAGGFGYHAYGKAGWSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTK 60
           +TGIHLCYAGGFGYHAYGKAGWSRRARVV +SLEKT+NG WEDVKSI+TWKRLDDQ LT 
Sbjct: 149 LTGIHLCYAGGFGYHAYGKAGWSRRARVVLVSLEKTDNGRWEDVKSIKTWKRLDDQNLTG 208

Query: 61  IDGQVLWSKSFDGNRRKKQDGGS 83
           IDGQVLWSKSF  NRRKKQD GS
Sbjct: 209 IDGQVLWSKSFGSNRRKKQDDGS 231


>Glyma07g05310.1 
          Length = 404

 Score =  130 bits (326), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/75 (78%), Positives = 64/75 (85%)

Query: 1   MTGIHLCYAGGFGYHAYGKAGWSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTK 60
           +  I LCYAGGFGYHAYGKAGWSRRARVV  SLEKTE G W DVKSI+TWKRLDDQ+LT 
Sbjct: 329 LMNIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTEKGSWGDVKSIKTWKRLDDQHLTG 388

Query: 61  IDGQVLWSKSFDGNR 75
           IDG+VLWSKS  GN+
Sbjct: 389 IDGEVLWSKSTGGNQ 403


>Glyma07g05310.2 
          Length = 369

 Score =  129 bits (325), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 59/75 (78%), Positives = 64/75 (85%)

Query: 1   MTGIHLCYAGGFGYHAYGKAGWSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTK 60
           +  I LCYAGGFGYHAYGKAGWSRRARVV  SLEKTE G W DVKSI+TWKRLDDQ+LT 
Sbjct: 294 LMNIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTEKGSWGDVKSIKTWKRLDDQHLTG 353

Query: 61  IDGQVLWSKSFDGNR 75
           IDG+VLWSKS  GN+
Sbjct: 354 IDGEVLWSKSTGGNQ 368


>Glyma16g01860.1 
          Length = 404

 Score =  123 bits (308), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/75 (74%), Positives = 61/75 (81%)

Query: 1   MTGIHLCYAGGFGYHAYGKAGWSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTK 60
           +  I LCY GGFGYHAYGKAGW RRARVV  SLEKT  G W DVKSI+TWKRLDDQ+LT 
Sbjct: 329 LMNIQLCYGGGFGYHAYGKAGWPRRARVVVASLEKTGKGSWGDVKSIKTWKRLDDQHLTG 388

Query: 61  IDGQVLWSKSFDGNR 75
           IDG+VLWSKS  GN+
Sbjct: 389 IDGEVLWSKSTGGNQ 403


>Glyma02g21800.1 
          Length = 146

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 50/62 (80%)

Query: 1   MTGIHLCYAGGFGYHAYGKAGWSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTK 60
           +  I LCY GGFGYHAYGKAGW RRARVV  SLEKT  G W DVKSI+TWKRLDDQ+LT 
Sbjct: 83  LMNIQLCYGGGFGYHAYGKAGWPRRARVVVASLEKTGKGSWGDVKSIKTWKRLDDQHLTG 142

Query: 61  ID 62
           ID
Sbjct: 143 ID 144


>Glyma03g42320.1 
          Length = 326

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/45 (75%), Positives = 37/45 (82%)

Query: 26  ARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTKIDGQVLWSKS 70
           ARVV +SLEKTENG WEDVKSI+TWKRLDDQ LT IDGQ    K+
Sbjct: 268 ARVVVVSLEKTENGRWEDVKSIKTWKRLDDQNLTGIDGQATAGKN 312


>Glyma15g18080.1 
          Length = 431

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 2/67 (2%)

Query: 1   MTGIHLCYAGGFGYHAYGKAGWSRRARVVEISLEKTENGDWEDVKSIRTWKRLDDQYLTK 60
           + GI  CY GGFGYH YGKA W RRAR++    E+     W +V+ I TWKRLDD+ ++K
Sbjct: 364 LDGIWFCYGGGFGYHGYGKAEWPRRARII--LAEQNGKKSWMNVQRIMTWKRLDDEKMSK 421

Query: 61  IDGQVLW 67
           ID Q+LW
Sbjct: 422 IDEQILW 428