Miyakogusa Predicted Gene

Lj0g3v0109009.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109009.2 tr|D3EPH5|D3EPH5_UCYNA ATP-dependent DNA helicase
RecG OS=cyanobacterium UCYN-A GN=UCYN_06780 PE=4
S,25,0.0000002,Nucleic acid-binding proteins,Nucleic acid-binding,
OB-fold-like; seg,NULL,CUFF.6257.2
         (544 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g21640.1                                                       503   e-142
Glyma09g20320.1                                                       371   e-102

>Glyma07g21640.1 
          Length = 401

 Score =  503 bits (1294), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/408 (67%), Positives = 310/408 (75%), Gaps = 36/408 (8%)

Query: 157 NFLPLKYSKWCYRMKHKFPEKKVVEMEPCGGRGSSLKLRNQVFALLDYN----------- 205
           +F+P   SK CYR+KHK  EKKV       G GS  KLRN+V AL+DYN           
Sbjct: 3   SFVP---SKMCYRLKHKLAEKKVAR-----GVGSGSKLRNKVVALMDYNLPDLIGNGSGE 54

Query: 206 ---KMSLKDVLDDSDISLICKTFPSITLGNAPKVDLYDGTELESETTNSSATEDSEQCFS 262
              KMS KD LDD DISLICK FPSITLG AP+VDLYDGT   SET NS ATE+ E  FS
Sbjct: 55  KKSKMSPKDALDDLDISLICKRFPSITLGYAPRVDLYDGTRSCSETMNSLATENFENSFS 114

Query: 263 DSSEARWVQNTLPEAQSPVYVDHSSVLSSSLQKDGSCP--LIPQPMSSICEENLDRVIKE 320
           DS EA WVQ+TL E +  +Y  HSS+ SS+L ++ SCP  L P    SI EE LD++ +E
Sbjct: 115 DSLEASWVQSTLSEERPSLYASHSSLTSSTLGEEDSCPSPLPPDLTPSIYEEKLDQITRE 174

Query: 321 VSQEKLGLQSQSNVTPNDLFLDESISCFPGLSKRHCRQLDDCGFHTF--------RKLLH 372
            SQ K+ ++SQSN TP++LFLD+S+SC PGLSKRH +QLD+ GFHTF        RKLL 
Sbjct: 175 DSQMKVRMESQSNSTPSELFLDKSVSCIPGLSKRHYQQLDNYGFHTFFGFSVLKFRKLLL 234

Query: 373 HFPRSYANLQNAHAKIDDGQYLIFVGKVLSSRGVKANCSFSFLEVIVGCQITDSESASGH 432
           HFPRSYANLQNAHAKIDDGQYLIFVGKVLSSRGVKAN SFSFLEV+VGCQ+ +SESA  H
Sbjct: 235 HFPRSYANLQNAHAKIDDGQYLIFVGKVLSSRGVKANFSFSFLEVVVGCQVAESESAPEH 294

Query: 433 VTGNAIDGQEKTIYLHLKKFFRGSRFTFKPFLSSIANKYREGDIACVSGKVRTMRAEDHY 492
           VT   ID Q KT+YLHLKKFFRGSRFTFK FL ++A KY+EGDI CVSGKVRTMRA+DHY
Sbjct: 295 VT---IDVQ-KTVYLHLKKFFRGSRFTFKAFLKNLAEKYQEGDIVCVSGKVRTMRAKDHY 350

Query: 493 EMREYNIDVLEDGKELSFCAKERPYPIYPSKGGLNPTFLRDIIARFVL 540
           EMREYNIDVLEDGK+LSF AKERPYPIYPSKG LNP FLRD IARFVL
Sbjct: 351 EMREYNIDVLEDGKDLSFFAKERPYPIYPSKGRLNPIFLRDTIARFVL 398


>Glyma09g20320.1 
          Length = 278

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/331 (60%), Positives = 228/331 (68%), Gaps = 58/331 (17%)

Query: 198 VFALLDYNKMSLKDVL----DDSDISLICKTFPSITLGNAPKVDLYDGTELESETTNSSA 253
           V AL+DYN   L D++    DD D SLICK FPSITLG+AP+VDLYDGT   S+T NS A
Sbjct: 1   VVALMDYN---LPDLIGNGSDDLDFSLICKRFPSITLGDAPRVDLYDGTRSCSKTMNSLA 57

Query: 254 TEDSEQCFSDSSEARWVQNTLPEAQSPVYVDHSSVLSSSLQKDGSCPLIPQPMSSICEEN 313
           TE+ E  F DSSEA WVQN                                      E+ 
Sbjct: 58  TENFEIFFFDSSEASWVQN--------------------------------------EKK 79

Query: 314 LDRVIKEVSQEKLGLQSQSNVTPNDLFLDESISCFPGLSKRHCRQLDDCGFHTFRKLLHH 373
           +D++ +E    K+G++ QSN TP++LFLD+S+SC P LSKRH +QLD+CGFHT RKLL H
Sbjct: 80  MDQITREDYPMKVGIELQSNPTPSELFLDKSVSCIPRLSKRHYQQLDNCGFHTLRKLLLH 139

Query: 374 FPRSYANLQNAHAKIDDGQYLIFVGKVLSSRGVKANCSFSFLEVIVGCQITDSESASGHV 433
           FPRSYANLQNAHAKIDD QYLIFVGKVLSSRGVKA+  F FL  +               
Sbjct: 140 FPRSYANLQNAHAKIDDRQYLIFVGKVLSSRGVKASFHFHFLRWLWA------------- 186

Query: 434 TGNAIDGQEKTIYLHLKKFFRGSRFTFKPFLSSIANKYREGDIACVSGKVRTMRAEDHYE 493
             +AID QEKT+YLHLKKFFRGSRFTFK FL S+A KY+EGDI CVSGKVRTM A+DHYE
Sbjct: 187 VNDAIDMQEKTVYLHLKKFFRGSRFTFKAFLKSLAEKYQEGDIVCVSGKVRTMHAKDHYE 246

Query: 494 MREYNIDVLEDGKELSFCAKERPYPIYPSKG 524
           MREYNIDVLEDGK+LSF AKERPYPIYPSKG
Sbjct: 247 MREYNIDVLEDGKDLSFFAKERPYPIYPSKG 277