Miyakogusa Predicted Gene

Lj0g3v0108779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108779.1 Non Chatacterized Hit- tr|I1K5H3|I1K5H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44868
PE,82.78,0,Thoc2,THO complex, subunitTHOC2, N-terminal; SUBFAMILY NOT
NAMED,NULL; THO2 PROTEIN,NULL; coiled-coi,gene.g8227.t1.1
         (629 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g34330.1                                                      1070   0.0  
Glyma08g05320.1                                                       898   0.0  
Glyma15g13540.1                                                        57   9e-08

>Glyma05g34330.1 
          Length = 1838

 Score = 1070 bits (2767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/633 (83%), Positives = 555/633 (87%), Gaps = 45/633 (7%)

Query: 1   MSFPAIERVYVTEDCVREWKTGNAALKV------------------RGELPLHKCKTALD 42
           MS P IE  YVTE+C+REW++GN ALKV                  RGELP  KCK ALD
Sbjct: 1   MSLPPIECAYVTEECIREWRSGNPALKVSQPVPMLRFLYELCWTMVRGELPFQKCKVALD 60

Query: 43  SVIFSEKASPDKIASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESDLVPVRLLHERC 102
           SVIFS+KAS +KIASNF+DIVTQMAQDHTMSGEFRSRLIKLARWLVES++VPVRLL ERC
Sbjct: 61  SVIFSDKASNEKIASNFSDIVTQMAQDHTMSGEFRSRLIKLARWLVESEMVPVRLLQERC 120

Query: 103 EEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKL----------- 151
           EEEFLGE ELIKIKAQELK KEVRVNTRLLYQQTKFNLLREESEGYAKL           
Sbjct: 121 EEEFLGEVELIKIKAQELKVKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAP 180

Query: 152 -------------SLIGHFDLDPNRVFDIVLECFELQPNNDVFIELIPIFPKSHASQILG 198
                        SLIGHFDLDPNRVFDIVLECFELQP++DVFIELIPIFPKSHASQILG
Sbjct: 181 TQKSSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILG 240

Query: 199 FKFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRF 258
           FKFQYYQRMEV+ PVPFGLYRLTALLVKQDFIDLDSIYAHLLP+DDEAFEHYNTFSSKR 
Sbjct: 241 FKFQYYQRMEVNGPVPFGLYRLTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRL 300

Query: 259 DEANKIGRINLAATGKDLMDEEKQGDVTKDLFAALDTETEAIEERMSELQDSQTLGLLTG 318
           DEANKIGRINLAA GKDLMD+EKQGDVT DLFAA+D ET+A+EER +ELQ SQTLGLLTG
Sbjct: 301 DEANKIGRINLAAIGKDLMDDEKQGDVTIDLFAAIDMETDAVEERTTELQSSQTLGLLTG 360

Query: 319 FLAVDDWYHAHILFERLSTLNAVEHTQICDSLFRLIEKSISSAYDVIRQAHVQNPGSSTG 378
           FL+VDDWYHAH+LFERLS LNAVEH QICDSLFRLI+KSISSAYDVIRQ H+QNPG STG
Sbjct: 361 FLSVDDWYHAHLLFERLSPLNAVEHIQICDSLFRLIKKSISSAYDVIRQTHLQNPGLSTG 420

Query: 379 GSTDAMDVDNSSGHGSFINLPKELFQMLACTGPYLYRDTMLLQKVHKVCRVLRGYYLSAL 438
           GSTD MDVDNSSG  SFI+LPKELFQMLACTGPYLYRDT+LLQ   KVCRVLRGYYLSAL
Sbjct: 421 GSTDVMDVDNSSGFSSFIDLPKELFQMLACTGPYLYRDTVLLQ---KVCRVLRGYYLSAL 477

Query: 439 ELVNRGNGALNPQSHVTGSPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELM 498
           ELV+ GNG LNPQ  V G+ HLHLK+ARLRVEDALGACLLPSLQLIPANPAVGQEIWELM
Sbjct: 478 ELVSHGNGVLNPQLQVPGNLHLHLKEARLRVEDALGACLLPSLQLIPANPAVGQEIWELM 537

Query: 499 SLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENVKQLGRMVAKLAH 558
           SLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKEN+KQLGRMVAKLAH
Sbjct: 538 SLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAH 597

Query: 559 ANPMTVLHTIVHQIEAYRDMITPVVDAFKYLTQ 591
           ANPMTVL TIVHQIEAYRDMITPVVDAFKYLTQ
Sbjct: 598 ANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQ 630


>Glyma08g05320.1 
          Length = 1729

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/505 (86%), Positives = 461/505 (91%), Gaps = 27/505 (5%)

Query: 111 ELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKL------------------- 151
           +LIKIKAQELKGKEVRVNTR+LYQQTKFNLLREESEGYAKL                   
Sbjct: 27  KLIKIKAQELKGKEVRVNTRILYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKSSAAT 86

Query: 152 -----SLIGHFDLDPNRVFDIVLECFELQPNNDVFIELIPIFPKSHASQILGFKFQYYQR 206
                SLIGHFDLDPNRVFDIVLECFELQP++DVFIELIPIFPKSHASQILGFKFQYYQR
Sbjct: 87  IGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILGFKFQYYQR 146

Query: 207 MEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRFDEANKIGR 266
           MEV++PVPFGLYRLTALLVKQDFIDLDSIYAHLLP+DDEAFEHYNTFSSKR DEANKIGR
Sbjct: 147 MEVNSPVPFGLYRLTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGR 206

Query: 267 INLAATGKDLMDEEKQGDVTKDLFAALDTETEAIEERMSELQDSQTLGLLTGFLAVDDWY 326
           INLAATGKDLMD+EKQGDVT DLFAA+D ET+AIEER +ELQ SQTLGLLTGFL+VDDWY
Sbjct: 207 INLAATGKDLMDDEKQGDVTIDLFAAIDMETDAIEERTTELQSSQTLGLLTGFLSVDDWY 266

Query: 327 HAHILFERLSTLNAVEHTQICDSLFRLIEKSISSAYDVIRQAHVQNPGSSTGGSTDAMDV 386
           HAH+LFE LS LNAVEH QICDSLFRLI+KSISSAYDVIRQ H+QNPGSSTGGSTD MDV
Sbjct: 267 HAHLLFECLSPLNAVEHIQICDSLFRLIKKSISSAYDVIRQTHLQNPGSSTGGSTDVMDV 326

Query: 387 DNSSGHGSFINLPKELFQMLACTGPYLYRDTMLLQKVHKVCRVLRGYYLSALELVNRGNG 446
           DNSSG+ SFI+LPKELFQMLACTGPYLYRDT+LLQ   KVCRVLRGYYLSALELV+ GNG
Sbjct: 327 DNSSGYSSFIDLPKELFQMLACTGPYLYRDTVLLQ---KVCRVLRGYYLSALELVSHGNG 383

Query: 447 ALNPQSHVTGSPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVR 506
            LNPQ  V G+PHLHLK+ARLRVEDALGACLLPSLQLIPANPAVGQEIWEL+SLLPYEVR
Sbjct: 384 VLNPQLQVPGNPHLHLKEARLRVEDALGACLLPSLQLIPANPAVGQEIWELLSLLPYEVR 443

Query: 507 YRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENVKQLGRMVAKLAHANPMTVLH 566
           YRLYGEWEKDDERIPMLL+ARQTAKLDTRRILKRLAKEN+KQLGRMVAKLAHANPMTVL 
Sbjct: 444 YRLYGEWEKDDERIPMLLSARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLR 503

Query: 567 TIVHQIEAYRDMITPVVDAFKYLTQ 591
           TIVHQIEAYRDMITPVVDAFKYLTQ
Sbjct: 504 TIVHQIEAYRDMITPVVDAFKYLTQ 528


>Glyma15g13540.1 
          Length = 352

 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 28/128 (21%)

Query: 199 FKFQYYQRMEVSNPVPFGLYRLTALLVKQDFIDLDSIYAHLLPKDDEAFEHYNTFSSKRF 258
           F   YY  +++ N    GL +    L+  +  D+ +I  + +      FE++   +S R 
Sbjct: 252 FDSNYYSNLQLQN----GLLQSDQELLSANNTDIVAIVNNFIMNQTLFFENFK--ASMR- 304

Query: 259 DEANKIGRINLAATGKDLMDEEKQGDVTKDLFAALDTETEAIEERMSELQDSQTLGLLTG 318
               K+G I +  TG        QG++             AIEER +ELQ SQTLGLLTG
Sbjct: 305 ----KMGNIGVL-TGS-------QGEIRSQY---------AIEERTTELQRSQTLGLLTG 343

Query: 319 FLAVDDWY 326
           FL+VDDWY
Sbjct: 344 FLSVDDWY 351