Miyakogusa Predicted Gene
- Lj0g3v0108539.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0108539.1 Non Chatacterized Hit- tr|I1K1M8|I1K1M8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.49,0,ARM
repeat,Armadillo-type fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Arma,CUFF.6241.1
(142 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g09170.1 269 6e-73
Glyma02g09790.1 254 2e-68
Glyma18g40410.1 82 2e-16
>Glyma05g09170.1
Length = 1176
Score = 269 bits (688), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/133 (96%), Positives = 130/133 (97%)
Query: 1 MCAIEHHPDSTTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLSKNVGEMRTETELLTQCW 60
MCAIEHHPDS+TRDSLTHTLFNLIKRPDEQQRRIIMDACVSL+KNVGEMRTETELL QCW
Sbjct: 484 MCAIEHHPDSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLAKNVGEMRTETELLPQCW 543
Query: 61 EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLAKL 120
EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLA L
Sbjct: 544 EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLAML 603
Query: 121 LPLFPNMDKYFKV 133
LPLF NMDKYFKV
Sbjct: 604 LPLFQNMDKYFKV 616
>Glyma02g09790.1
Length = 1160
Score = 254 bits (649), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 120/138 (86%), Positives = 130/138 (94%)
Query: 1 MCAIEHHPDSTTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLSKNVGEMRTETELLTQCW 60
MCAIE HPDS+TRDSLTHTLFNLIKRPDEQQRRIIMDACV+L+KNVGEMRTETELL QCW
Sbjct: 467 MCAIERHPDSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVNLAKNVGEMRTETELLPQCW 526
Query: 61 EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLAKL 120
EQI+HMYEERRLLVAQSCGELA+FVR EIR+SLILSIVQQLIEDSA++VREAAA NLA L
Sbjct: 527 EQISHMYEERRLLVAQSCGELADFVRLEIRNSLILSIVQQLIEDSASVVREAAARNLAML 586
Query: 121 LPLFPNMDKYFKVSFTIY 138
LPLFPNMDKYFKV ++
Sbjct: 587 LPLFPNMDKYFKVEDMMF 604
>Glyma18g40410.1
Length = 154
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 8/66 (12%)
Query: 56 LTQC-WE-------QINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSAT 107
LT C W+ INHMYEE RL+V QSCGELA+FV P+IR S+ILSIVQQLI+ SAT
Sbjct: 7 LTNCKWKLNVYSGHNINHMYEEHRLVVGQSCGELAKFVWPDIRVSVILSIVQQLIQHSAT 66
Query: 108 IVREAA 113
I RE
Sbjct: 67 IAREVV 72