Miyakogusa Predicted Gene

Lj0g3v0108539.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108539.1 Non Chatacterized Hit- tr|I1K1M8|I1K1M8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.49,0,ARM
repeat,Armadillo-type fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Arma,CUFF.6241.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g09170.1                                                       269   6e-73
Glyma02g09790.1                                                       254   2e-68
Glyma18g40410.1                                                        82   2e-16

>Glyma05g09170.1 
          Length = 1176

 Score =  269 bits (688), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 128/133 (96%), Positives = 130/133 (97%)

Query: 1   MCAIEHHPDSTTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLSKNVGEMRTETELLTQCW 60
           MCAIEHHPDS+TRDSLTHTLFNLIKRPDEQQRRIIMDACVSL+KNVGEMRTETELL QCW
Sbjct: 484 MCAIEHHPDSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLAKNVGEMRTETELLPQCW 543

Query: 61  EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLAKL 120
           EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLA L
Sbjct: 544 EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLAML 603

Query: 121 LPLFPNMDKYFKV 133
           LPLF NMDKYFKV
Sbjct: 604 LPLFQNMDKYFKV 616


>Glyma02g09790.1 
          Length = 1160

 Score =  254 bits (649), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 120/138 (86%), Positives = 130/138 (94%)

Query: 1   MCAIEHHPDSTTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLSKNVGEMRTETELLTQCW 60
           MCAIE HPDS+TRDSLTHTLFNLIKRPDEQQRRIIMDACV+L+KNVGEMRTETELL QCW
Sbjct: 467 MCAIERHPDSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVNLAKNVGEMRTETELLPQCW 526

Query: 61  EQINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSATIVREAAAHNLAKL 120
           EQI+HMYEERRLLVAQSCGELA+FVR EIR+SLILSIVQQLIEDSA++VREAAA NLA L
Sbjct: 527 EQISHMYEERRLLVAQSCGELADFVRLEIRNSLILSIVQQLIEDSASVVREAAARNLAML 586

Query: 121 LPLFPNMDKYFKVSFTIY 138
           LPLFPNMDKYFKV   ++
Sbjct: 587 LPLFPNMDKYFKVEDMMF 604


>Glyma18g40410.1 
          Length = 154

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 8/66 (12%)

Query: 56  LTQC-WE-------QINHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLIEDSAT 107
           LT C W+        INHMYEE RL+V QSCGELA+FV P+IR S+ILSIVQQLI+ SAT
Sbjct: 7   LTNCKWKLNVYSGHNINHMYEEHRLVVGQSCGELAKFVWPDIRVSVILSIVQQLIQHSAT 66

Query: 108 IVREAA 113
           I RE  
Sbjct: 67  IAREVV 72