Miyakogusa Predicted Gene
- Lj0g3v0107629.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0107629.1 Non Chatacterized Hit- tr|G7LAI0|G7LAI0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.44,6e-18,DLC,Dynein light chain, type 1/2; no
description,Dynein light chain, type 1/2; Dynein_light,Dynein
l,CUFF.6154.1
(140 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g07720.1 181 2e-46
Glyma05g34910.1 181 2e-46
Glyma08g04800.1 180 4e-46
Glyma16g26790.1 179 6e-46
Glyma17g10320.1 107 4e-24
Glyma05g01580.1 105 1e-23
Glyma17g12490.1 101 2e-22
Glyma12g35200.1 89 2e-18
Glyma13g35300.1 86 9e-18
Glyma08g00340.1 77 7e-15
Glyma15g16060.1 67 4e-12
Glyma15g16050.1 67 7e-12
Glyma06g42180.1 67 8e-12
Glyma09g04830.1 66 1e-11
Glyma08g04230.1 64 4e-11
Glyma15g01900.1 61 3e-10
Glyma13g43410.1 61 4e-10
Glyma07g16690.1 60 5e-10
>Glyma02g07720.1
Length = 133
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 100/137 (72%), Gaps = 8/137 (5%)
Query: 5 AEKELDRRSKFLHSLIQNKKKTNTEQHDDGDDSTSSSLNRSNVHVRACDMPLPLQNHAFQ 64
AEKEL+RRSKFL+SLIQ KKK E + + S V VRACDMPLPLQN AFQ
Sbjct: 4 AEKELERRSKFLNSLIQQKKKAAIESEHEHESSL-------KVDVRACDMPLPLQNRAFQ 56
Query: 65 CARQHLDSMPXXXXX-XXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSI 123
CAR +L+SMP EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSI
Sbjct: 57 CARLYLESMPPANKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSI 116
Query: 124 DKVFILLFKTAVQPLNH 140
DKV+ILLFKTAV+PL+H
Sbjct: 117 DKVYILLFKTAVEPLDH 133
>Glyma05g34910.1
Length = 133
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 101/138 (73%), Gaps = 9/138 (6%)
Query: 4 GAEKELDRRSKFLHSLIQNKKKT-NTEQHDDGDDSTSSSLNRSNVHVRACDMPLPLQNHA 62
GAE+EL+RRSKFL SLIQ KK EQHD L +NV VRACDMPLPLQ+ A
Sbjct: 3 GAEEELERRSKFLKSLIQKKKTIEQQEQHD--------HLQHNNVRVRACDMPLPLQSRA 54
Query: 63 FQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFS 122
F+CAR LDSMP EFDSSYGPAWHCIVGTSFGSYVTHS+GGF+YFS
Sbjct: 55 FRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFVYFS 114
Query: 123 IDKVFILLFKTAVQPLNH 140
IDKV++LLFKTAV+PL+H
Sbjct: 115 IDKVYVLLFKTAVEPLDH 132
>Glyma08g04800.1
Length = 133
Score = 180 bits (457), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 100/138 (72%), Gaps = 9/138 (6%)
Query: 4 GAEKELDRRSKFLHSLIQNKKKT-NTEQHDDGDDSTSSSLNRSNVHVRACDMPLPLQNHA 62
GA++EL+RRSKFL SLIQ KK EQHD L +NV VRACDMPLPLQN A
Sbjct: 3 GAQEELERRSKFLKSLIQKKKTIEQQEQHD--------HLQHNNVRVRACDMPLPLQNRA 54
Query: 63 FQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFS 122
F+CAR LDSMP EFD+SYGPAWHCIVGTSFGSYVTHS GGF+YFS
Sbjct: 55 FRCARDLLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVGTSFGSYVTHSFGGFVYFS 114
Query: 123 IDKVFILLFKTAVQPLNH 140
IDKV++LLFKTAV+PL+H
Sbjct: 115 IDKVYVLLFKTAVEPLDH 132
>Glyma16g26790.1
Length = 130
Score = 179 bits (455), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 100/137 (72%), Gaps = 11/137 (8%)
Query: 5 AEKELDRRSKFLHSLIQNKKKTNTEQHDDGDDSTSSSLNRSNVHVRACDMPLPLQNHAFQ 64
AEKEL+RRSKFL+SLIQ KKK EQH+ VHVRACDMPLPLQN A Q
Sbjct: 4 AEKELERRSKFLNSLIQKKKK-GIEQHEH---------ESFKVHVRACDMPLPLQNRALQ 53
Query: 65 CARQHLDSMPXXXXX-XXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSI 123
CAR HL+SMP EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSI
Sbjct: 54 CARLHLESMPPGNKLDNKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSI 113
Query: 124 DKVFILLFKTAVQPLNH 140
DKV+ILLFKTAV+PL+H
Sbjct: 114 DKVYILLFKTAVEPLDH 130
>Glyma17g10320.1
Length = 259
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 51 ACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSY 110
+ DMP +Q HA CAR+ +DSM EFD YGPAWHCIVGTSFGS+
Sbjct: 172 SVDMPPFMQIHAVDCARKAIDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSF 229
Query: 111 VTHSVGGFLYFSID-KVFILLFKTAVQ 136
VTHSVGGFLYFS+D K++ILLFKTAVQ
Sbjct: 230 VTHSVGGFLYFSMDQKLYILLFKTAVQ 256
>Glyma05g01580.1
Length = 246
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Query: 51 ACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSY 110
+ DMP +Q HA CAR+ +DSM EFD YGPAWHCIVGTSFGS+
Sbjct: 159 SVDMPPFMQIHAVDCARKAIDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSF 216
Query: 111 VTHSVGGFLYFSID-KVFILLFKTAV 135
VTHSVGGFLYFS+D K++ILLFKTAV
Sbjct: 217 VTHSVGGFLYFSMDKKLYILLFKTAV 242
>Glyma17g12490.1
Length = 176
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 36 DSTSSSLNRSNVHVRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSY 95
++ SS + V V DMP +Q HAF+CAR+ DS+ EFD +Y
Sbjct: 74 ETLSSVIAYLQVKVLVSDMPTFMQVHAFRCARRTYDSLEKFSAKLIAHNIKK--EFDKAY 131
Query: 96 GPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQP 137
GP WHCIVG++FGS+VTHS G FLYFS++ ++ILLFKT V+
Sbjct: 132 GPVWHCIVGSNFGSFVTHSTGCFLYFSMENLYILLFKTKVKK 173
>Glyma12g35200.1
Length = 152
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 45 SNVHVRACDMPLPLQNHAFQCARQ--HLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCI 102
SNV +++ DMP +Q HA + R L P EFDS YG AWHC+
Sbjct: 51 SNVRLKSSDMPSHMQEHALRHTRSLFPLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCV 110
Query: 103 VGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAV 135
+G SFGS+V+H+ GGF+YFSID + +LLFKT V
Sbjct: 111 IGKSFGSFVSHTGGGFIYFSIDSLSVLLFKTEV 143
>Glyma13g35300.1
Length = 142
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 46 NVHVRACDMPLPLQNHAFQCARQH--LDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIV 103
NV +++ MPL +Q HA + R L P EFDS YG AWHC++
Sbjct: 42 NVRLKSSHMPLHMQEHALRHTRSLFLLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCVI 101
Query: 104 GTSFGSYVTHSVGGFLYFSIDKVFILLFKTAV 135
G SFGS+V+H+ GGF+YFSID + +LLFKT V
Sbjct: 102 GNSFGSFVSHTGGGFIYFSIDSLSVLLFKTEV 133
>Glyma08g00340.1
Length = 60
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 41/47 (87%)
Query: 90 EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQ 136
EFD +YGP WHCIVG++FGS+VTHS G FLYFS++ ++ILLFKT V+
Sbjct: 10 EFDKAYGPVWHCIVGSNFGSFVTHSTGCFLYFSMENLYILLFKTKVK 56
>Glyma15g16060.1
Length = 118
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 32 DDGDDSTSSSLNRSNVHVRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEF 91
DD + + ++ V +++ DM +Q A A + EF
Sbjct: 20 DDQKQAPALNVPPKKVIIKSADMIPDMQKEAVDIAVAAFERY----NVEKDVAEQIKKEF 75
Query: 92 DSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKT 133
D +GP WHCIVG +FGSYVTH F+YF +D+ +LLFK+
Sbjct: 76 DKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 117
>Glyma15g16050.1
Length = 122
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 37 STSSSLNRSNVHVRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYG 96
S + ++ V +++ DM +Q A A + EFD +G
Sbjct: 29 SPAPAVPPKKVIIKSADMIPDMQKEAVDIAVAAFEKY----NVEKDVAEQIKKEFDKRHG 84
Query: 97 PAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKT 133
P WHCIVG +FGSYVTH F+YF +D+ +LLFK+
Sbjct: 85 PTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 121
>Glyma06g42180.1
Length = 109
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%)
Query: 90 EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQPLNH 140
EFD +GP W CIVGT FGS+VTH G F+YF + + ILLF+ + P H
Sbjct: 47 EFDRMHGPGWQCIVGTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAH 97
>Glyma09g04830.1
Length = 122
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 90 EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTA 134
EFD +GP WHCIVG +FGSYVTH F+YF +D+ +LLFK+
Sbjct: 78 EFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 122
>Glyma08g04230.1
Length = 93
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 49 VRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFG 108
V+ DM +Q HA A Q LD EFDS YG W C+VG++FG
Sbjct: 8 VKETDMSTKMQIHAMASASQALD--LYDVYDCISIAAHIKKEFDSVYGNGWQCVVGSNFG 65
Query: 109 SYVTHSVGGFLYFSIDKVFILLFK 132
Y THS G F+YF++ + L+FK
Sbjct: 66 CYFTHSSGTFIYFALATLNFLIFK 89
>Glyma15g01900.1
Length = 95
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 53 DMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVT 112
DMP +Q A A + LD EFD+ YG W C+VG+SFG + T
Sbjct: 12 DMPDKMQIQAMASASEALD--LYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSFGCFFT 69
Query: 113 HSVGGFLYFSIDKVFILLFKTA 134
HS G F+YF+++ + L+FK A
Sbjct: 70 HSKGTFVYFTLETLNFLIFKGA 91
>Glyma13g43410.1
Length = 95
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 53 DMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVT 112
DMP +Q A A + LD EFD+ YG W C+VG+SFG + T
Sbjct: 12 DMPDKMQIQAMASAYEALD--LYDVFDCTSIAAHIKKEFDTKYGSGWQCVVGSSFGCFFT 69
Query: 113 HSVGGFLYFSIDKVFILLFKTA 134
HS G F+YF+++ + L+FK A
Sbjct: 70 HSKGTFVYFTLETLNFLIFKGA 91
>Glyma07g16690.1
Length = 130
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 49 VRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFG 108
VR DMP +Q++ + A Q LD+ + D +YGPAW+ +VG FG
Sbjct: 26 VRETDMPEGMQSYVMELAHQALDA--HEVSDCQSIAHFIKQKLDEAYGPAWNSVVGKDFG 83
Query: 109 SYVTHSVGGFLYFSIDKVFILLFK 132
S +TH G F++F ++ + L+FK
Sbjct: 84 SCITHLCGSFIFFRVEMMEFLIFK 107