Miyakogusa Predicted Gene

Lj0g3v0107329.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0107329.2 Non Chatacterized Hit- tr|D7M148|D7M148_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,44.16,1e-17,seg,NULL; coiled-coil,NULL,CUFF.6126.2
         (216 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g37710.1                                                       195   3e-50

>Glyma11g37710.1 
          Length = 570

 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/151 (68%), Positives = 114/151 (75%), Gaps = 3/151 (1%)

Query: 14  DRALAV--AGKRITCDELYLXXXXXXX-VMSTFEGQPYLMDEVEEVEGALFELTHEHQLR 70
           DRAL V  +GKR TCDELYL        + S FE +PYLMDE+ EVEGAL ELTHEHQLR
Sbjct: 13  DRALVVTDSGKRFTCDELYLSVSDDDSDIASGFEVRPYLMDELGEVEGALLELTHEHQLR 72

Query: 71  VKDEIRSKISVLETALVMESENSTSSLLRVEKYKETRRELDKKFDTQYQRRIAEELDNHL 130
           VKDEIR+KIS LETALV E++NSTSS LRVEKYKETR +LDKKFDTQYQRRIAE LDNHL
Sbjct: 73  VKDEIRNKISALETALVNETQNSTSSFLRVEKYKETRLDLDKKFDTQYQRRIAEALDNHL 132

Query: 131 TVVQQDXXXXXXXXXXXXXNDAANEEAKRKI 161
           T VQ+D             +DAA EEAKRK+
Sbjct: 133 TAVQRDRELRSQIEERKIRSDAAYEEAKRKV 163