Miyakogusa Predicted Gene

Lj0g3v0107099.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0107099.1 Non Chatacterized Hit- tr|I3SKZ0|I3SKZ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.05,0,no
description,NULL; FIBRILLARIN,Fibrillarin, conserved site; RRNA
2-O-METHYLTRANSFERASE FIBRILLARIN,CUFF.6117.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g36090.1                                                       405   e-113
Glyma06g17310.1                                                       400   e-112
Glyma18g02340.1                                                       400   e-112
Glyma04g37770.1                                                       400   e-112
Glyma15g23670.1                                                       154   1e-37
Glyma10g31490.1                                                        65   7e-11
Glyma09g25300.1                                                        55   8e-08

>Glyma11g36090.1 
          Length = 246

 Score =  405 bits (1042), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/210 (93%), Positives = 206/210 (98%), Gaps = 1/210 (0%)

Query: 57  MKGGSRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVW 116
           MKGGS+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ EDGTKEEYRVW
Sbjct: 1   MKGGSKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDGTKEEYRVW 59

Query: 117 NPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSG 176
           NPFRSKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSG
Sbjct: 60  NPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSG 119

Query: 177 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILGLNASYFLKTG 236
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILGLNASY+LKTG
Sbjct: 120 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKTG 179

Query: 237 GHFVISIKANCIDSTVPAETVFVNEVNKLK 266
           GHFVISIKANCIDSTVPAE VF +EVNKLK
Sbjct: 180 GHFVISIKANCIDSTVPAEAVFESEVNKLK 209


>Glyma06g17310.1 
          Length = 246

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/210 (92%), Positives = 205/210 (97%), Gaps = 1/210 (0%)

Query: 57  MKGGSRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVW 116
           MKGGS+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ ED +K+EYRVW
Sbjct: 1   MKGGSKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDSSKDEYRVW 59

Query: 117 NPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSG 176
           NPFRSKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSG
Sbjct: 60  NPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSG 119

Query: 177 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILGLNASYFLKTG 236
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILGLNASY+LKTG
Sbjct: 120 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKTG 179

Query: 237 GHFVISIKANCIDSTVPAETVFVNEVNKLK 266
           GHFVISIKANCIDSTVPAE VF +EVNKLK
Sbjct: 180 GHFVISIKANCIDSTVPAEAVFESEVNKLK 209


>Glyma18g02340.1 
          Length = 313

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/210 (92%), Positives = 205/210 (97%), Gaps = 1/210 (0%)

Query: 57  MKGGSRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVW 116
           MKGGS+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ EDG+K+EYRVW
Sbjct: 68  MKGGSKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVW 126

Query: 117 NPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSG 176
           NPFRSKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSG
Sbjct: 127 NPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSG 186

Query: 177 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILGLNASYFLKTG 236
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILGLNASY+LK G
Sbjct: 187 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAG 246

Query: 237 GHFVISIKANCIDSTVPAETVFVNEVNKLK 266
           GHFVISIKANCIDSTVPAE VF +EVNKLK
Sbjct: 247 GHFVISIKANCIDSTVPAEAVFESEVNKLK 276


>Glyma04g37770.1 
          Length = 306

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/210 (92%), Positives = 205/210 (97%), Gaps = 1/210 (0%)

Query: 57  MKGGSRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVW 116
           MKGGS+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ EDG+K+EYRVW
Sbjct: 61  MKGGSKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVW 119

Query: 117 NPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSG 176
           NPFRSKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSG
Sbjct: 120 NPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSG 179

Query: 177 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILGLNASYFLKTG 236
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVAQPDQARILGLNASY+LK G
Sbjct: 180 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAG 239

Query: 237 GHFVISIKANCIDSTVPAETVFVNEVNKLK 266
           GHFVISIKANCIDSTVPAE VF +EVNKLK
Sbjct: 240 GHFVISIKANCIDSTVPAEAVFESEVNKLK 269


>Glyma15g23670.1 
          Length = 164

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/94 (81%), Positives = 84/94 (89%), Gaps = 1/94 (1%)

Query: 61  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVWNPFR 120
           S+VVV+PHRH+GIFIAKG KEDALVTKNLV GEAVYNEKR+ VQ EDG+K+EYRVW PFR
Sbjct: 41  SKVVVQPHRHDGIFIAKG-KEDALVTKNLVHGEAVYNEKRIIVQNEDGSKDEYRVWIPFR 99

Query: 121 SKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVS 154
           SKL AAILGGV NIWIKP AKVLYLG ASGT V+
Sbjct: 100 SKLVAAILGGVYNIWIKPRAKVLYLGTASGTDVA 133


>Glyma10g31490.1 
          Length = 74

 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 30/31 (96%)

Query: 106 EDGTKEEYRVWNPFRSKLAAAILGGVDNIWI 136
           EDG+K+EYRVWNPF SKLAAAILGGVDNIWI
Sbjct: 2   EDGSKDEYRVWNPFPSKLAAAILGGVDNIWI 32


>Glyma09g25300.1 
          Length = 100

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 36/42 (85%), Gaps = 2/42 (4%)

Query: 61  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVT 102
           S+V+V+P+RH+G FIAK  K+DA+V KNLV  EAVYNEKR+T
Sbjct: 61  SKVMVQPYRHDGFFIAK-DKKDAIV-KNLVLSEAVYNEKRIT 100