Miyakogusa Predicted Gene

Lj0g3v0106569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106569.1 Non Chatacterized Hit- tr|D8U2G2|D8U2G2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,45.83,4e-19,Prefoldin_2,Prefoldin beta-like; coiled-coil,NULL;
seg,NULL; Prefoldin,Prefoldin; SUBFAMILY NOT NAME,CUFF.6099.1
         (127 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g30520.1                                                       207   3e-54
Glyma20g36840.1                                                       206   5e-54
Glyma10g17530.1                                                        84   5e-17

>Glyma10g30520.1 
          Length = 126

 Score =  207 bits (526), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 100/125 (80%), Positives = 111/125 (88%)

Query: 3   HQGGGSETEVTWEDQQNINKFGRLNNRLHELDDEIKVAKETNENFEDASNELILTDEDVV 62
            QGGGSETEVTWEDQQNINKFGRLNNR HEL+DEIK+AKETN+N EDASNELILTDE+V+
Sbjct: 2   QQGGGSETEVTWEDQQNINKFGRLNNRFHELEDEIKIAKETNDNLEDASNELILTDEEVI 61

Query: 63  RFQIGEVFAHVPKDEVESRIEQMQEVTSXXXXXXXXXXXSVLAQMAELKKVLYAKFNDSI 122
           RFQIGEVFAHVPKDEVE+RIEQ++EVTS           S+LAQMAELKK+LYAKFNDSI
Sbjct: 62  RFQIGEVFAHVPKDEVENRIEQIKEVTSQKLAKLEEEKESILAQMAELKKILYAKFNDSI 121

Query: 123 NLEEE 127
           NLEE+
Sbjct: 122 NLEED 126


>Glyma20g36840.1 
          Length = 126

 Score =  206 bits (524), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/125 (80%), Positives = 111/125 (88%)

Query: 3   HQGGGSETEVTWEDQQNINKFGRLNNRLHELDDEIKVAKETNENFEDASNELILTDEDVV 62
            QGGGSETEVTWEDQQNINKFGRLNNR HEL+DEIK+AKETN+N EDASNELILTDE+V+
Sbjct: 2   QQGGGSETEVTWEDQQNINKFGRLNNRFHELEDEIKIAKETNDNLEDASNELILTDEEVI 61

Query: 63  RFQIGEVFAHVPKDEVESRIEQMQEVTSXXXXXXXXXXXSVLAQMAELKKVLYAKFNDSI 122
           RFQIGEVFAHVPKDEVE+RIEQ++EVTS           SVLAQMAELKK+LYAKFNDSI
Sbjct: 62  RFQIGEVFAHVPKDEVENRIEQIKEVTSQKLEKLEEEKESVLAQMAELKKILYAKFNDSI 121

Query: 123 NLEEE 127
           NLEE+
Sbjct: 122 NLEED 126


>Glyma10g17530.1 
          Length = 62

 Score = 83.6 bits (205), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 48/60 (80%)

Query: 68  EVFAHVPKDEVESRIEQMQEVTSXXXXXXXXXXXSVLAQMAELKKVLYAKFNDSINLEEE 127
           +VFAHVPKDEVE+RIEQ+ +VTS           S+LAQMAELKK+LYAKFNDSINLEE+
Sbjct: 3   KVFAHVPKDEVENRIEQINKVTSQKLEKLEEEKESILAQMAELKKILYAKFNDSINLEED 62