Miyakogusa Predicted Gene
- Lj0g3v0106359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0106359.1 Non Chatacterized Hit- tr|J3LTZ8|J3LTZ8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,49.44,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Raffinose_syn,Raffinose
synthase,NODE_32364_length_1246_cov_522.880432.path2.1
(89 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g32250.1 138 1e-33
Glyma03g29440.1 128 2e-30
Glyma14g01430.1 63 6e-11
Glyma02g47330.1 58 3e-09
Glyma04g36410.1 56 7e-09
Glyma17g11970.4 53 9e-08
Glyma17g11970.3 53 9e-08
Glyma17g11970.1 53 9e-08
Glyma17g11970.2 52 1e-07
Glyma13g22890.1 50 5e-07
>Glyma19g32250.1
Length = 340
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 79/105 (75%), Gaps = 16/105 (15%)
Query: 1 MFNTGGAVEQVEI-----NKPELFDGEV--------SSN---TATIALKVRGNGRFGVYS 44
MFNTGG+VE VEI NKPELFDGEV SSN T TIAL+VRG GRFGVYS
Sbjct: 236 MFNTGGSVEHVEIHRASNNKPELFDGEVLSEMTSWLSSNRAATTTIALRVRGRGRFGVYS 295
Query: 45 SQSPLKCAVDGSETDFFYDSETGLTTFLIPVPSEELYRWSIEIQV 89
SQ PLKC V G+ETDF YDS+TGLTTF IPVP EE+YRWSIE QV
Sbjct: 296 SQRPLKCVVGGTETDFNYDSDTGLTTFSIPVPPEEMYRWSIEFQV 340
>Glyma03g29440.1
Length = 750
Score = 128 bits (321), Expect = 2e-30, Method: Composition-based stats.
Identities = 64/89 (71%), Positives = 68/89 (76%), Gaps = 8/89 (8%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFNTGGAVEQVEI+ + T TIAL VRG GRFGVYSSQ PLKC V G+ETDF
Sbjct: 670 MFNTGGAVEQVEIHN--------RAATKTIALSVRGRGRFGVYSSQRPLKCVVGGAETDF 721
Query: 61 FYDSETGLTTFLIPVPSEELYRWSIEIQV 89
YDSETGLTTF IPV EE+YRWSIEIQV
Sbjct: 722 NYDSETGLTTFSIPVSPEEMYRWSIEIQV 750
>Glyma14g01430.1
Length = 755
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN+GGAV++ S+ + +A+KVRG G+FG YSS P VD E +F
Sbjct: 676 MFNSGGAVKEFNWG---------SNESTNVAMKVRGCGQFGAYSSAQPKLITVDSEEVEF 726
Query: 61 FYDSETGLTTFLIPVPSEELYRWSIEI 87
Y+ E+GL T + VP +ELY+WSI I
Sbjct: 727 KYEEESGLVTIDLRVPEKELYQWSISI 753
>Glyma02g47330.1
Length = 756
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN+GGAV++ S+ + +A+KV G G+FG YSS P VD E +F
Sbjct: 677 MFNSGGAVKEFSWG---------SNESTNVAVKVPGCGQFGAYSSARPKLITVDLEEVEF 727
Query: 61 FYDSETGLTTFLIPVPSEELYRWSIEI 87
Y+ E+GL T + VP +ELY+WSI I
Sbjct: 728 KYEEESGLVTIDLRVPEKELYQWSISI 754
>Glyma04g36410.1
Length = 760
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
M+N+GGAVE + D + I +K RG GRFG YS+ P C VD E +F
Sbjct: 683 MYNSGGAVEAL--------DCTMDVAQCIIKIKGRGCGRFGAYSNVRPKLCVVDMKEEEF 734
Query: 61 FYDSETGLTTFLI 73
FY+ E GL T +
Sbjct: 735 FYNREDGLLTITL 747
>Glyma17g11970.4
Length = 747
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSE-TD 59
MFN G AVE G V + L+++G G+FG YSS P KC + E D
Sbjct: 664 MFNAGAAVE-----------GLVFEEDGLVRLEIKGCGKFGAYSSARPTKCLLGNHELLD 712
Query: 60 FFYDSETGLTTFLIP-VPSE 78
F YD+++GL TF I +P E
Sbjct: 713 FDYDADSGLLTFNIDHLPQE 732
>Glyma17g11970.3
Length = 747
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSE-TD 59
MFN G AVE G V + L+++G G+FG YSS P KC + E D
Sbjct: 664 MFNAGAAVE-----------GLVFEEDGLVRLEIKGCGKFGAYSSARPTKCLLGNHELLD 712
Query: 60 FFYDSETGLTTFLIP-VPSE 78
F YD+++GL TF I +P E
Sbjct: 713 FDYDADSGLLTFNIDHLPQE 732
>Glyma17g11970.1
Length = 747
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSE-TD 59
MFN G AVE G V + L+++G G+FG YSS P KC + E D
Sbjct: 664 MFNAGAAVE-----------GLVFEEDGLVRLEIKGCGKFGAYSSARPTKCLLGNHELLD 712
Query: 60 FFYDSETGLTTFLIP-VPSE 78
F YD+++GL TF I +P E
Sbjct: 713 FDYDADSGLLTFNIDHLPQE 732
>Glyma17g11970.2
Length = 651
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSE-TD 59
MFN G AVE G V + L+++G G+FG YSS P KC + E D
Sbjct: 568 MFNAGAAVE-----------GLVFEEDGLVRLEIKGCGKFGAYSSARPTKCLLGNHELLD 616
Query: 60 FFYDSETGLTTFLIP-VPSE 78
F YD+++GL TF I +P E
Sbjct: 617 FDYDADSGLLTFNIDHLPQE 636
>Glyma13g22890.1
Length = 749
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSE-TD 59
MFN GGAVE + + + ++V+G G+FG YSS P +C + +E D
Sbjct: 667 MFNAGGAVEGLVYEQ------------GLVRVEVKGCGKFGAYSSAKPTRCMLGNNEVVD 714
Query: 60 FFYDSETGLTTFLIPVPSEELYR 82
F YD+++GL F I +E +R
Sbjct: 715 FDYDADSGLLIFNIDHLPQEGHR 737