Miyakogusa Predicted Gene

Lj0g3v0105899.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105899.1 tr|C1MSU1|C1MSU1_MICPC CorA metal ion transporter
family OS=Micromonas pusilla (strain CCMP1545)
GN=,46.15,0.00000000000002,SUBFAMILY NOT NAMED,NULL; RNA SPLICING
PROTEIN MRS2, MITOCHONDRIAL,Magnesium transporter
MRS2/LPE10;,CUFF.6042.1
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g05470.1                                                       221   5e-58
Glyma01g45290.2                                                        49   4e-06
Glyma01g45290.3                                                        49   5e-06
Glyma01g45290.1                                                        49   5e-06

>Glyma17g05470.1 
          Length = 283

 Score =  221 bits (563), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 110/117 (94%), Positives = 114/117 (97%)

Query: 123 NGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAM 182
           NG VSTRKINRRQLLKSSGLRPRDIRSVDPSLF+TNSMP+LLVREYAILLNLGSLRAIAM
Sbjct: 1   NGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAM 60

Query: 183 QDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQR 239
           QDCVLIFD NR GG+AFLE+LLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQR
Sbjct: 61  QDCVLIFDNNRIGGKAFLETLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLEQR 117


>Glyma01g45290.2 
          Length = 380

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 19/150 (12%)

Query: 103 GDSLSLGIREP---VYEVVEVKSNGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNS 159
           G+  S GIR+    V + + +   G     +  +  +++ +GL  RD+R +DP L    S
Sbjct: 4   GEERSTGIRKKGSGVRQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLL----S 59

Query: 160 MPS-LLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRL----------- 207
            PS LL RE AI++NL  ++AI     VL+ +        FL+ L  R+           
Sbjct: 60  YPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFLQELQARILRHHHQTLADA 119

Query: 208 NPKNNNGGPSMPFELEVVEAALLSRIQRLE 237
           NP  ++    +PFE   +EA L +    LE
Sbjct: 120 NPNPDDAIKILPFEFVALEACLEAACSVLE 149


>Glyma01g45290.3 
          Length = 378

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 19/150 (12%)

Query: 103 GDSLSLGIREP---VYEVVEVKSNGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNS 159
           G+  S GIR+    V + + +   G     +  +  +++ +GL  RD+R +DP L    S
Sbjct: 4   GEERSTGIRKKGSGVRQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLL----S 59

Query: 160 MPS-LLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRL----------- 207
            PS LL RE AI++NL  ++AI     VL+ +        FL+ L  R+           
Sbjct: 60  YPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFLQELQARILRHHHQTLADA 119

Query: 208 NPKNNNGGPSMPFELEVVEAALLSRIQRLE 237
           NP  ++    +PFE   +EA L +    LE
Sbjct: 120 NPNPDDAIKILPFEFVALEACLEAACSVLE 149


>Glyma01g45290.1 
          Length = 393

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 19/150 (12%)

Query: 103 GDSLSLGIREP---VYEVVEVKSNGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNS 159
           G+  S GIR+    V + + +   G     +  +  +++ +GL  RD+R +DP L    S
Sbjct: 4   GEERSTGIRKKGSGVRQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLL----S 59

Query: 160 MPS-LLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRL----------- 207
            PS LL RE AI++NL  ++AI     VL+ +        FL+ L  R+           
Sbjct: 60  YPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFLQELQARILRHHHQTLADA 119

Query: 208 NPKNNNGGPSMPFELEVVEAALLSRIQRLE 237
           NP  ++    +PFE   +EA L +    LE
Sbjct: 120 NPNPDDAIKILPFEFVALEACLEAACSVLE 149