Miyakogusa Predicted Gene

Lj0g3v0105289.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105289.1 Non Chatacterized Hit- tr|I1KC34|I1KC34_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.67,0,SNURPORTIN1
(RNUT1 PROTEIN) (RNA, U TRANSPORTER 1),NULL; DNA ligase/mRNA capping
enzyme, catalytic d,CUFF.5997.1
         (417 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g17890.1                                                       693   0.0  
Glyma04g37160.1                                                       564   e-161

>Glyma06g17890.1 
          Length = 414

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/418 (79%), Positives = 366/418 (87%), Gaps = 5/418 (1%)

Query: 1   MAPHDLRRPFKRPAISDQERRRQHSLLRQAQNRLDAQRHARFLASTVFSLSSQTPDSSEI 60
           MAPHDLRRPFKRPAISDQERRR+ SLLRQAQ+R DAQRHARFLAS   SL  +TP+    
Sbjct: 1   MAPHDLRRPFKRPAISDQERRREQSLLRQAQSRQDAQRHARFLASAALSLPPKTPEPESE 60

Query: 61  ELDLVPEPENQPEPSHKELDVLEASKLKGSEARKWFSKQLMHPEWMIDIPDSLSPNWFVF 120
               + E E   +  ++ LD++ AS L  +EARKWF+KQLMHPEWMIDIP++L+ +WFVF
Sbjct: 61  PKPELAETEASSDSGYESLDIVGASTLSAAEARKWFAKQLMHPEWMIDIPNNLAQDWFVF 120

Query: 121 ARPSGKRCFVVSCNGTTISRLRNGSVLHRFPSALPSGARKKDSGSSQSYSILDCIFHELD 180
           ARPSGKRCFVVSCNGTTISRLRNG++LHRFPSALPSGARKKD     SYSILDCIFHE+D
Sbjct: 121 ARPSGKRCFVVSCNGTTISRLRNGAILHRFPSALPSGARKKDP----SYSILDCIFHEVD 176

Query: 181 QTYYVIDMVCWRDYSLYDCTAEFRFFWLNSKVAESGACDPPSHYHKYRFSLVPVYSCDRD 240
           QTYYVIDMVCWRDY L DCTAEFRFFWL SK+AE+GA DPPS+YHKYRFSLVPVYSCD  
Sbjct: 177 QTYYVIDMVCWRDYPLSDCTAEFRFFWLTSKLAETGAFDPPSYYHKYRFSLVPVYSCDSS 236

Query: 241 GLYAAYTAPVPYVKDGLLFYNKHAHYQAGITPLVLVWKDENCSQYVMDTDSKGQVPNQQQ 300
           GLYAAY+APVPYVKDGLLFYNKH+HYQAGITPL LVWKDENCSQYV+DTDSKGQVPNQQQ
Sbjct: 237 GLYAAYSAPVPYVKDGLLFYNKHSHYQAGITPLALVWKDENCSQYVLDTDSKGQVPNQQQ 296

Query: 301 VVLELQEDGKLTTSDDPPVVFGCLDGSFTQQSELLSGCLLRFAIGEAGLVLVDGKLEKAD 360
           VVLELQEDGKLTTSDDPPVVFGCLDGSF QQS L SGCLLRF+IGE G VL+DGKLEKAD
Sbjct: 297 VVLELQEDGKLTTSDDPPVVFGCLDGSFIQQSGLHSGCLLRFSIGEGGFVLMDGKLEKAD 356

Query: 361 LNYLGKVNRARASADSFSK-VMFQYSVRHSPLRIDDLLGSVSSPVDEESKPCDIEMDG 417
           L+YLGK NRARASADSFSK VMFQ+SVRHSPLRI+ LL SV  PVD+ESK CD+EMDG
Sbjct: 357 LHYLGKANRARASADSFSKVVMFQHSVRHSPLRIEGLLESVGLPVDQESKACDVEMDG 414


>Glyma04g37160.1 
          Length = 313

 Score =  564 bits (1453), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/317 (84%), Positives = 290/317 (91%), Gaps = 4/317 (1%)

Query: 101 MHPEWMIDIPDSLSPNWFVFARPSGKRCFVVSCNGTTISRLRNGSVLHRFPSALPSGARK 160
           M PEWMIDIP++L+ +WFVFARPSGKRCFVVSCNG TISRLRNG+VLHRFPS LPSGARK
Sbjct: 1   MLPEWMIDIPNNLAQDWFVFARPSGKRCFVVSCNGATISRLRNGAVLHRFPSGLPSGARK 60

Query: 161 KDSGSSQSYSILDCIFHELDQTYYVIDMVCWRDYSLYDCTAEFRFFWLNSKVAESGACDP 220
           KD     SYSILDCIFHE DQTYYVIDMVCWR Y L DCTAEFRFFWL SK+AE+ A +P
Sbjct: 61  KDP----SYSILDCIFHEADQTYYVIDMVCWRGYPLSDCTAEFRFFWLTSKLAETDAFEP 116

Query: 221 PSHYHKYRFSLVPVYSCDRDGLYAAYTAPVPYVKDGLLFYNKHAHYQAGITPLVLVWKDE 280
           PSHYHKYRFSLVPV++CD +GLYAAY+APVPYVKDGLLFYNKHAHYQAGITPL LVWKDE
Sbjct: 117 PSHYHKYRFSLVPVFNCDSNGLYAAYSAPVPYVKDGLLFYNKHAHYQAGITPLALVWKDE 176

Query: 281 NCSQYVMDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPVVFGCLDGSFTQQSELLSGCLL 340
           NCSQYV+DTDSKGQVPNQQQVVLELQ+DGKLTTSDDPP+VFGCLDGSF QQS L SGCLL
Sbjct: 177 NCSQYVLDTDSKGQVPNQQQVVLELQDDGKLTTSDDPPMVFGCLDGSFIQQSGLHSGCLL 236

Query: 341 RFAIGEAGLVLVDGKLEKADLNYLGKVNRARASADSFSKVMFQYSVRHSPLRIDDLLGSV 400
           RF+IGE GLVL+DGKL+KADL+YLGK NRARASADSFSKVMFQ+SVRHSPLRID LL SV
Sbjct: 237 RFSIGEGGLVLMDGKLDKADLHYLGKANRARASADSFSKVMFQHSVRHSPLRIDGLLESV 296

Query: 401 SSPVDEESKPCDIEMDG 417
           S PVD+ESK CDIEMDG
Sbjct: 297 SLPVDQESKACDIEMDG 313