Miyakogusa Predicted Gene

Lj0g3v0105269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105269.1 Non Chatacterized Hit- tr|B6U5R0|B6U5R0_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,77.27,0.00000000000009,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.6018.1
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g22460.1                                                       319   1e-87
Glyma17g11250.1                                                       316   1e-86
Glyma15g26090.1                                                        82   4e-16
Glyma10g35460.1                                                        50   2e-06
Glyma13g40010.1                                                        49   3e-06

>Glyma13g22460.1 
          Length = 747

 Score =  319 bits (817), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 150/171 (87%), Positives = 158/171 (92%)

Query: 34  IFEYFGWVYHLGVNSLGHEYCHLRFLFIRGKHLSMYKRDPHEYPSLKPIRQGVVGPALMV 93
           IFEY GWVYHLGVNS+GHEYCHLRFLFIRGK++SMYKRDPH+ P LKPIRQG+VGP LMV
Sbjct: 32  IFEYSGWVYHLGVNSIGHEYCHLRFLFIRGKYVSMYKRDPHDNPGLKPIRQGIVGPTLMV 91

Query: 94  EELGRRRVNNGDLYVLRFYNRLDETKKGEIACATAGEVRGWTEAFDHAKQQVEYELSRGG 153
           EELGRR+VNNGDLYVLRFYNRLDETKKGEIACATAG+ RGW EAFD AKQQ EYELSRG 
Sbjct: 92  EELGRRKVNNGDLYVLRFYNRLDETKKGEIACATAGDARGWMEAFDQAKQQAEYELSRGV 151

Query: 154 SARDKLNMEAEINLEGHRPRVRRVSHGLRKHIRIGQGPEILLRQSSKLASR 204
           SARDKLNMEAEINLEGHRPRVRR +HGLRK IRIGQGPE LLRQSSKLA R
Sbjct: 152 SARDKLNMEAEINLEGHRPRVRRYAHGLRKLIRIGQGPEKLLRQSSKLAVR 202


>Glyma17g11250.1 
          Length = 743

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 149/171 (87%), Positives = 158/171 (92%)

Query: 34  IFEYFGWVYHLGVNSLGHEYCHLRFLFIRGKHLSMYKRDPHEYPSLKPIRQGVVGPALMV 93
           IFEY GWVYHLGVNS+GHEYCHLRFLFIRGK++SMYKRDPH+ P LKPIRQGVVGP LMV
Sbjct: 28  IFEYSGWVYHLGVNSIGHEYCHLRFLFIRGKYVSMYKRDPHDNPGLKPIRQGVVGPTLMV 87

Query: 94  EELGRRRVNNGDLYVLRFYNRLDETKKGEIACATAGEVRGWTEAFDHAKQQVEYELSRGG 153
           EELGRR+VNNGDLYVLRF+NRLDETKKGEIACATAG+ RGW EAFD AKQQ EYELSRG 
Sbjct: 88  EELGRRKVNNGDLYVLRFFNRLDETKKGEIACATAGDARGWMEAFDQAKQQAEYELSRGV 147

Query: 154 SARDKLNMEAEINLEGHRPRVRRVSHGLRKHIRIGQGPEILLRQSSKLASR 204
           SAR+KLNMEAEINLEGHRPRVRR +HGLRK IRIGQGPE LLRQSSKLA R
Sbjct: 148 SAREKLNMEAEINLEGHRPRVRRYAHGLRKLIRIGQGPEKLLRQSSKLAIR 198


>Glyma15g26090.1 
          Length = 63

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 41/46 (89%)

Query: 34 IFEYFGWVYHLGVNSLGHEYCHLRFLFIRGKHLSMYKRDPHEYPSL 79
          +F+YFGWVYH+GVNS+G EYCHLRFL +RGK ++MYKRDPH+ P +
Sbjct: 18 MFQYFGWVYHIGVNSVGREYCHLRFLLVRGKCVAMYKRDPHQNPGI 63


>Glyma10g35460.1 
          Length = 723

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 39  GWVYHLGVNSLGHEYCHLRFLFIRGKHLSMYKRDPHEYPSLKPIRQGVVGPALMVEELGR 98
           GW+Y +  N  G  Y   R+  ++G  L  +K  P      +PIR  ++   + V + GR
Sbjct: 12  GWLYLIRANRFGQHYSRKRYFILKGNALRSFKIKPTSQME-EPIRSAIIDSCIRVNDNGR 70

Query: 99  RRVNNGDLYVLRFYNRLDETKK 120
             +N   L++   YN  D++ K
Sbjct: 71  ETMNKNVLFIFTVYNATDQSDK 92


>Glyma13g40010.1 
          Length = 713

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 39  GWVYHLGVNSLGHEYCHLRFLFIRGKHLSMYKRDPHEYPSLKPIRQGVVGPALMVEELGR 98
           GW+Y +  N +G ++   R+  + G  L  +K  P       P+R  +V   + V + GR
Sbjct: 3   GWLYLIRFNRIGLQFSRKRYFVLDGNLLRSFKSVP------DPVRSAIVDSCIRVMDNGR 56

Query: 99  RRVNNGDLYVLRFYNRLDETKKGEIACATAGEVRGWTEAFDHA 141
             VN    ++   YN L+   + +   +   E   W ++F  A
Sbjct: 57  ESVNRKVFFIFTLYNTLNHNDQLKFGASRPEEAARWIQSFHEA 99