Miyakogusa Predicted Gene

Lj0g3v0105109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105109.1 tr|K1VW22|K1VW22_SPIPL 50S ribosomal protein L10
OS=Arthrospira platensis C1 PE=4
SV=1,34.22,1e-18,Ribosomal_L10,Ribosomal protein L10; SUBFAMILY NOT
NAMED,Ribosomal protein L10; FAMILY NOT NAMED,NUL,CUFF.5990.1
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08370.1                                                       363   e-100
Glyma13g22310.1                                                       223   1e-58
Glyma16g17130.1                                                        82   4e-16

>Glyma17g08370.1 
          Length = 232

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/228 (79%), Positives = 199/228 (87%), Gaps = 5/228 (2%)

Query: 1   MEATASALSFALPSPKSQT-FQILNRPINPF---NPGPTFKPLRHRFSSITAAIPRTKKE 56
           MEATASA+SFALPS K+Q   Q+L RP NPF   +  P  +P   R  +I AAIPRTKKE
Sbjct: 1   MEATASAMSFALPSTKAQAQAQLLTRPTNPFTIPSRSPAHRP-PPRLPTIRAAIPRTKKE 59

Query: 57  ETVDSVRKQLENCYLLAGINYKGFTVKQFQELRKTLPETTTLIVAKNTLVYKAVEGTEWE 116
            TV++VR+QLENCYLLAGINYKGFTVKQFQELRKTLPETT LIVAKNTLVYKAVEGT WE
Sbjct: 60  ATVETVREQLENCYLLAGINYKGFTVKQFQELRKTLPETTKLIVAKNTLVYKAVEGTPWE 119

Query: 117 TLKPCMKGMNVWLFVHTEEIPKAIKPYRDFQKEKKLDENDFTGAVFEGKFYGPNEFKKLE 176
           TLKPCMKGMNVWLFVHTEEIP AIKPYR+FQKEKKL++NDFTGAVFEGKFYGP+E K LE
Sbjct: 120 TLKPCMKGMNVWLFVHTEEIPSAIKPYRNFQKEKKLEDNDFTGAVFEGKFYGPDEVKNLE 179

Query: 177 TLPTRAEIYANLLGSLKSPASALVSTLQAPARELVMTLKAHVKNLEEQ 224
           +LPTRAEIYA LLG+LKSPASALV TLQ+PARELV  LKAH+KNLEEQ
Sbjct: 180 SLPTRAEIYATLLGALKSPASALVGTLQSPARELVTVLKAHIKNLEEQ 227


>Glyma13g22310.1 
          Length = 214

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/224 (57%), Positives = 146/224 (65%), Gaps = 51/224 (22%)

Query: 1   MEATASALSFALPSPKSQTFQILNRPINPFNPGPTFKPLRHRFSSITAAIPRTKKEETVD 60
           MEATASA++ +  +      Q+L RP NPF   P+  P   R  +I AAIPR+KKE TV+
Sbjct: 1   MEATASAMTSS-KAQAQAQAQLLARPTNPFT-VPSRGP--ARLPTIRAAIPRSKKEATVE 56

Query: 61  SVRKQLENCYLLAGINYKGFTVKQFQELRKTLPETTTLIVAKNTLVYKAVEGTEWETLKP 120
           +                                               AVEGT WETLKP
Sbjct: 57  T-----------------------------------------------AVEGTPWETLKP 69

Query: 121 CMKGMNVWLFVHTEEIPKAIKPYRDFQKEKKLDENDFTGAVFEGKFYGPNEFKKLETLPT 180
           CMKGMNVWLFVHTEEIP AIKPY +FQKEKKL++NDFTGAVFEGKFYGP+E K LE+LPT
Sbjct: 70  CMKGMNVWLFVHTEEIPSAIKPYWNFQKEKKLEDNDFTGAVFEGKFYGPDEVKNLESLPT 129

Query: 181 RAEIYANLLGSLKSPASALVSTLQAPARELVMTLKAHVKNLEEQ 224
           RAEIYA LLG+LKSPASALV+TLQAPARELV  LKAH+KNLEEQ
Sbjct: 130 RAEIYATLLGALKSPASALVATLQAPARELVTVLKAHIKNLEEQ 173


>Glyma16g17130.1 
          Length = 85

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 50/63 (79%)

Query: 162 FEGKFYGPNEFKKLETLPTRAEIYANLLGSLKSPASALVSTLQAPARELVMTLKAHVKNL 221
           F GKFYGP++ K LE+LPTRA+IY  LLG+LKS  SAL+ TLQ+  R+LV  LKA++KN 
Sbjct: 15  FTGKFYGPDKVKNLESLPTRAKIYDTLLGALKSLRSALIDTLQSLTRQLVTVLKAYIKNP 74

Query: 222 EEQ 224
           +EQ
Sbjct: 75  QEQ 77