Miyakogusa Predicted Gene

Lj0g3v0104939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104939.2 Non Chatacterized Hit- tr|I1MS55|I1MS55_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37875 PE,70,0.00000007,
,CUFF.5969.2
         (42 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g05220.1                                                        62   2e-10
Glyma13g17270.1                                                        61   3e-10
Glyma15g19980.1                                                        58   2e-09
Glyma09g08350.1                                                        58   3e-09

>Glyma17g05220.1 
          Length = 1091

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/40 (70%), Positives = 31/40 (77%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+ENAFKRAVPWL   F MKD  SS+F  FSL+Q
Sbjct: 379 MPDDESDMENAFKRAVPWLGDDFGMKDASSSIFPGFSLMQ 418


>Glyma13g17270.1 
          Length = 1091

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/40 (70%), Positives = 31/40 (77%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+ENAFKRAVPWL   F MKD  SS+F  FSL+Q
Sbjct: 339 MPDDESDMENAFKRAVPWLGDDFGMKDASSSIFPGFSLVQ 378


>Glyma15g19980.1 
          Length = 1112

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 30/40 (75%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+ENAFKRA+PWL     MKD  SSVF  FSL+Q
Sbjct: 379 MPDDESDIENAFKRAMPWLGDDLGMKDASSSVFPGFSLMQ 418


>Glyma09g08350.1 
          Length = 1073

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 30/40 (75%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDDE D+ENAFKRA+PWL     MKD  SSVF  FSL+Q
Sbjct: 327 MPDDESDIENAFKRAMPWLGDDLGMKDASSSVFPGFSLMQ 366