Miyakogusa Predicted Gene

Lj0g3v0104809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104809.1 tr|D5LAY5|D5LAY5_CHLRE 97782m OS=Chlamydomonas
reinhardtii GN=97782m PE=4 SV=1,31.38,4e-19,UNCHARACTERIZED,GINS
complex, subunit Psf3; Sld5,GINS complex,CUFF.5957.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g35260.2                                                       318   3e-87
Glyma11g35260.1                                                       318   3e-87
Glyma18g03140.1                                                       299   1e-81

>Glyma11g35260.2 
          Length = 184

 Score =  318 bits (814), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 162/185 (87%), Positives = 172/185 (92%), Gaps = 1/185 (0%)

Query: 1   MAKYYDIDDIMVEEEIVSVIFQKSASGVGIDPSSETDLIEAGSKVELPFWLAHELQLRQA 60
           MAKYYDIDDI++EEE VSVIFQ++ASGVGIDPSS   LIE GSKVELPFWLAHELQLRQA
Sbjct: 1   MAKYYDIDDIIIEEETVSVIFQRAASGVGIDPSSSI-LIETGSKVELPFWLAHELQLRQA 59

Query: 61  VSVNVPPCFNQKTRLEIQADSASVDLKSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 120
           VSVNVPPCFNQKTR E+ ADSA VDL+SRCPFFYEFGCKIAPIVGDRTIGFLLL+AFKSR
Sbjct: 60  VSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLTAFKSR 119

Query: 121 YKEVLTKAHTAAFATGSKFWTILTKEEINLYEVAQSAMASFKKWRMGGPRFQISNVLGRK 180
           YKE+LTKAHT AFA GSKFWTILTKEEI LYE AQSAMASFKKWRMGGPRFQI++VLGRK
Sbjct: 120 YKEILTKAHTVAFAPGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRK 179

Query: 181 RKSTE 185
           RKS E
Sbjct: 180 RKSKE 184


>Glyma11g35260.1 
          Length = 184

 Score =  318 bits (814), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 162/185 (87%), Positives = 172/185 (92%), Gaps = 1/185 (0%)

Query: 1   MAKYYDIDDIMVEEEIVSVIFQKSASGVGIDPSSETDLIEAGSKVELPFWLAHELQLRQA 60
           MAKYYDIDDI++EEE VSVIFQ++ASGVGIDPSS   LIE GSKVELPFWLAHELQLRQA
Sbjct: 1   MAKYYDIDDIIIEEETVSVIFQRAASGVGIDPSSSI-LIETGSKVELPFWLAHELQLRQA 59

Query: 61  VSVNVPPCFNQKTRLEIQADSASVDLKSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 120
           VSVNVPPCFNQKTR E+ ADSA VDL+SRCPFFYEFGCKIAPIVGDRTIGFLLL+AFKSR
Sbjct: 60  VSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLTAFKSR 119

Query: 121 YKEVLTKAHTAAFATGSKFWTILTKEEINLYEVAQSAMASFKKWRMGGPRFQISNVLGRK 180
           YKE+LTKAHT AFA GSKFWTILTKEEI LYE AQSAMASFKKWRMGGPRFQI++VLGRK
Sbjct: 120 YKEILTKAHTVAFAPGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRK 179

Query: 181 RKSTE 185
           RKS E
Sbjct: 180 RKSKE 184


>Glyma18g03140.1 
          Length = 162

 Score =  299 bits (765), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 146/185 (78%), Positives = 153/185 (82%), Gaps = 23/185 (12%)

Query: 1   MAKYYDIDDIMVEEEIVSVIFQKSASGVGIDPSSETDLIEAGSKVELPFWLAHELQLRQA 60
           MAKYYDIDDI+VEEEI                       E GSKVELPFWLAHELQLRQA
Sbjct: 1   MAKYYDIDDIIVEEEI-----------------------ETGSKVELPFWLAHELQLRQA 37

Query: 61  VSVNVPPCFNQKTRLEIQADSASVDLKSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 120
           VSVNVPPCFNQKTR E+ ADSA VDL+SRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR
Sbjct: 38  VSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSR 97

Query: 121 YKEVLTKAHTAAFATGSKFWTILTKEEINLYEVAQSAMASFKKWRMGGPRFQISNVLGRK 180
           YKE+LTKAH+ AFA GSKFWTILTKEEI LYE AQSAMASFKKWRMGGPRFQI++VLGRK
Sbjct: 98  YKEILTKAHSVAFAAGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRK 157

Query: 181 RKSTE 185
           RKS E
Sbjct: 158 RKSKE 162